Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 GPG1YGL121C 381 nt0.06□□□□□ -2.4
LSM1P47017 CSM4YPL200W 471 nt0.06□□□□□ -2.4
LSM1P47017 PET111YMR257C 2403 nt0.04□□□□□ -2.4
LSM1P47017 YDR344CYDR344C 444 nt0.04□□□□□ -2.4
LSM1P47017 YFR057WYFR057W 456 nt0.04□□□□□ -2.4
LSM1P47017 YJL127W-AYJL127W-A 117 nt0.04□□□□□ -2.4
LSM1P47017 VAM3YOR106W 852 nt0.04□□□□□ -2.4
LSM1P47017 MLP1YKR095W 5628 nt0.03□□□□□ -2.4
LSM1P47017 AFR1YDR085C 1863 nt0.03□□□□□ -2.41
LSM1P47017 YOR192C-BYOR192C-B 5313 nt0.02□□□□□ -2.41
LSM1P47017 CWC23YGL128C 852 nt0.02□□□□□ -2.41
LSM1P47017 STF2YGR008C 255 nt0.02□□□□□ -2.41
LSM1P47017 YGR228WYGR228W 345 nt0.02□□□□□ -2.41
LSM1P47017 YJR079WYJR079W 330 nt0.02□□□□□ -2.41
LSM1P47017 YKL145W-AYKL145W-A 93 nt0.02□□□□□ -2.41
LSM1P47017 SDS22YKL193C 1017 nt0.02□□□□□ -2.41
LSM1P47017 YBL107W-AYBL107W-A 105 nt0.02□□□□□ -2.41
LSM1P47017 YOR248WYOR248W 303 nt0.02□□□□□ -2.41
LSM1P47017 FYV10YIL097W 1551 nt0.02□□□□□ -2.41
LSM1P47017 ZIP2YGL249W 2115 nt0.01□□□□□ -2.41
LSM1P47017 snR5snR5 204 nt0.01□□□□□ -2.41
LSM1P47017 BSC3YLR465C 309 nt0.01□□□□□ -2.41
LSM1P47017 CDC33YOL139C 642 nt0.01□□□□□ -2.41
LSM1P47017 YOR108C-AYOR108C-A 210 nt0.01□□□□□ -2.41
LSM1P47017 BIG1YHR101C 1008 nt0□□□□□ -2.41
LSM1P47017 COX12YLR038C 252 nt0□□□□□ -2.41
LSM1P47017 VIK1YPL253C 1944 nt0□□□□□ -2.41
LSM1P47017 YDR269CYDR269C 324 nt-0.02□□□□□ -2.41
LSM1P47017 VMA21YGR105W 234 nt-0.02□□□□□ -2.41
LSM1P47017 RCN2YOR220W 798 nt-0.02□□□□□ -2.41
LSM1P47017 PKH2YOL100W 3246 nt-0.03□□□□□ -2.41
LSM1P47017 YGR115CYGR115C 780 nt-0.03□□□□□ -2.41
LSM1P47017 YPL044CYPL044C 549 nt-0.03□□□□□ -2.41
LSM1P47017 POP7YBR167C 423 nt-0.03□□□□□ -2.41
LSM1P47017 YIR021W-AYIR021W-A 213 nt-0.04□□□□□ -2.42
LSM1P47017 YJL135WYJL135W 318 nt-0.04□□□□□ -2.42
LSM1P47017 YPT6YLR262C 648 nt-0.04□□□□□ -2.42
LSM1P47017 YBL100W-BYBL100W-B 5313 nt-0.05□□□□□ -2.42
LSM1P47017 SEC8YPR055W 3198 nt-0.05□□□□□ -2.42
LSM1P47017 YMR290W-AYMR290W-A 348 nt-0.05□□□□□ -2.42
LSM1P47017 tF(GAA)BtF(GAA)B 73 nt-0.06□□□□□ -2.42
LSM1P47017 WIP1YDR374W-A 270 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)FtF(GAA)F 73 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)GtF(GAA)G 73 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)H1tF(GAA)H1 73 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)H2tF(GAA)H2 73 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)MtF(GAA)M 73 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)P1tF(GAA)P1 73 nt-0.06□□□□□ -2.42
LSM1P47017 tF(GAA)P2tF(GAA)P2 73 nt-0.06□□□□□ -2.42
LSM1P47017 SPO13YHR014W 876 nt-0.06□□□□□ -2.42
LSM1P47017 YOR053WYOR053W 342 nt-0.06□□□□□ -2.42
LSM1P47017 INP2YMR163C 2118 nt-0.07□□□□□ -2.42
LSM1P47017 HUG1YML058W-A 207 nt-0.07□□□□□ -2.42
LSM1P47017 YNL050CYNL050C 813 nt-0.07□□□□□ -2.42
LSM1P47017 PHS1YJL097W 654 nt-0.08□□□□□ -2.42
LSM1P47017 IRC16YPR038W 360 nt-0.08□□□□□ -2.42
LSM1P47017 snR13snR13 124 nt-0.09□□□□□ -2.42
LSM1P47017 YBR063CYBR063C 1215 nt-0.09□□□□□ -2.42
LSM1P47017 MRPL32YCR003W 552 nt-0.1□□□□□ -2.43
LSM1P47017 snR9snR9 187 nt-0.1□□□□□ -2.43
LSM1P47017 ILM1YJR118C 612 nt-0.1□□□□□ -2.43
LSM1P47017 YBR064WYBR064W 429 nt-0.1□□□□□ -2.43
LSM1P47017 YPR039WYPR039W 336 nt-0.1□□□□□ -2.43
LSM1P47017 YCL002CYCL002C 792 nt-0.1□□□□□ -2.43
LSM1P47017 PRP42YDR235W 1635 nt-0.1□□□□□ -2.43
LSM1P47017 MCM10YIL150C 1716 nt-0.1□□□□□ -2.43
LSM1P47017 PRP5YBR237W 2550 nt-0.1□□□□□ -2.43
LSM1P47017 CUL3YGR003W 2235 nt-0.11□□□□□ -2.43
LSM1P47017 YGL239CYGL239C 315 nt-0.11□□□□□ -2.43
LSM1P47017 YIR018C-AYIR018C-A 138 nt-0.11□□□□□ -2.43
LSM1P47017 YPL185WYPL185W 396 nt-0.11□□□□□ -2.43
LSM1P47017 YGL230CYGL230C 444 nt-0.12□□□□□ -2.43
LSM1P47017 SCEIQ0160 708 nt-0.12□□□□□ -2.43
LSM1P47017 YMR141W-AYMR141W-A 225 nt-0.12□□□□□ -2.43
LSM1P47017 YOL160WYOL160W 342 nt-0.12□□□□□ -2.43
LSM1P47017 YBR076C-AYBR076C-A 267 nt-0.12□□□□□ -2.43
LSM1P47017 snR190snR190 190 nt-0.12□□□□□ -2.43
LSM1P47017 EFR3YMR212C 2349 nt-0.12□□□□□ -2.43
LSM1P47017 RCO1YMR075W 2055 nt-0.12□□□□□ -2.43
LSM1P47017 ASE1YOR058C 2658 nt-0.12□□□□□ -2.43
LSM1P47017 THO2YNL139C 4794 nt-0.13□□□□□ -2.43
LSM1P47017 OLI1Q0130 231 nt-0.13□□□□□ -2.43
LSM1P47017 PRP21YJL203W 843 nt-0.13□□□□□ -2.43
LSM1P47017 YMR254CYMR254C 309 nt-0.13□□□□□ -2.43
LSM1P47017 COG8YML071C 1824 nt-0.13□□□□□ -2.43
LSM1P47017 YDR029WYDR029W 315 nt-0.14□□□□□ -2.43
LSM1P47017 MND1YGL183C 660 nt-0.14□□□□□ -2.43
LSM1P47017 APQ13YJL075C 417 nt-0.14□□□□□ -2.43
LSM1P47017 RAD34YDR314C 2079 nt-0.15□□□□□ -2.43
LSM1P47017 OST4YDL232W 111 nt-0.15□□□□□ -2.43
LSM1P47017 COX5BYIL111W 456 nt-0.15□□□□□ -2.43
LSM1P47017 YKL068W-AYKL068W-A 237 nt-0.15□□□□□ -2.43
LSM1P47017 YLR198CYLR198C 360 nt-0.15□□□□□ -2.43
LSM1P47017 YLR232WYLR232W 348 nt-0.15□□□□□ -2.43
LSM1P47017 MRPL50YNR022C 420 nt-0.15□□□□□ -2.43
LSM1P47017 ORC3YLL004W 1851 nt-0.16□□□□□ -2.43
LSM1P47017 HAL9YOL089C 3093 nt-0.16□□□□□ -2.43
LSM1P47017 RPL35AYDL191W 363 nt-0.16□□□□□ -2.44
LSM1P47017 RPS27AYKL156W 249 nt-0.16□□□□□ -2.44
LSM1P47017 YBL008W-AYBL008W-A 240 nt-0.16□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 53.9 ms