Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRCC3P46736 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.48■■□□□ 1.03
BRCC3P46736 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.48■■□□□ 1.03
BRCC3P46736 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.48■■□□□ 1.03
BRCC3P46736 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.48■■□□□ 1.03
BRCC3P46736 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRCC3P46736 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRCC3P46736 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BRCC3P46736 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
BRCC3P46736 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
BRCC3P46736 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
BRCC3P46736 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.48■■□□□ 1.03
BRCC3P46736 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRCC3P46736 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.47■■□□□ 1.03
BRCC3P46736 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.47■■□□□ 1.03
BRCC3P46736 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRCC3P46736 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BRCC3P46736 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.47■■□□□ 1.03
BRCC3P46736 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.47■■□□□ 1.03
BRCC3P46736 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.47■■□□□ 1.03
BRCC3P46736 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.47■■□□□ 1.03
BRCC3P46736 AC007225.1-201ENST00000566331 1836 ntBASIC21.47■■□□□ 1.03
BRCC3P46736 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BRCC3P46736 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.47■■□□□ 1.03
BRCC3P46736 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
BRCC3P46736 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.46■■□□□ 1.03
BRCC3P46736 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRCC3P46736 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
BRCC3P46736 AC007375.3-201ENST00000600936 2314 ntBASIC21.46■■□□□ 1.03
BRCC3P46736 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
BRCC3P46736 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.46■■□□□ 1.03
BRCC3P46736 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
BRCC3P46736 MIR718-201ENST00000390190 70 ntBASIC21.46■■□□□ 1.03
BRCC3P46736 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.46■■□□□ 1.03
BRCC3P46736 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BRCC3P46736 AC110285.5-201ENST00000611501 352 ntBASIC21.46■■□□□ 1.03
BRCC3P46736 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRCC3P46736 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BRCC3P46736 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
BRCC3P46736 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.46■■□□□ 1.03
BRCC3P46736 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
BRCC3P46736 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.45■■□□□ 1.03
BRCC3P46736 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.45■■□□□ 1.02
BRCC3P46736 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.45■■□□□ 1.02
BRCC3P46736 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.45■■□□□ 1.02
BRCC3P46736 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.45■■□□□ 1.02
BRCC3P46736 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.45■■□□□ 1.02
BRCC3P46736 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
BRCC3P46736 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.45■■□□□ 1.02
BRCC3P46736 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BRCC3P46736 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRCC3P46736 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.44■■□□□ 1.02
BRCC3P46736 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
BRCC3P46736 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRCC3P46736 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.44■■□□□ 1.02
BRCC3P46736 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRCC3P46736 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.44■■□□□ 1.02
BRCC3P46736 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
BRCC3P46736 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRCC3P46736 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.44■■□□□ 1.02
BRCC3P46736 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRCC3P46736 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
BRCC3P46736 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRCC3P46736 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.43■■□□□ 1.02
BRCC3P46736 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.43■■□□□ 1.02
BRCC3P46736 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
BRCC3P46736 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 SNORA78-201ENST00000459373 127 ntBASIC21.43■■□□□ 1.02
BRCC3P46736 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 PRKY-204ENST00000533551 1019 ntBASIC21.43■■□□□ 1.02
BRCC3P46736 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.43■■□□□ 1.02
BRCC3P46736 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.43■■□□□ 1.02
BRCC3P46736 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.43■■□□□ 1.02
BRCC3P46736 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
BRCC3P46736 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.43■■□□□ 1.02
BRCC3P46736 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.43■■□□□ 1.02
BRCC3P46736 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.43■■□□□ 1.02
BRCC3P46736 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.43■■□□□ 1.02
BRCC3P46736 AL121829.2-201ENST00000620908 328 ntBASIC21.43■■□□□ 1.02
BRCC3P46736 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRCC3P46736 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.43■■□□□ 1.02
BRCC3P46736 DPP3P2-201ENST00000416030 1696 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms