Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MCRIP2P1-201ENST00000394346 511 ntBASIC21.07■□□□□ 0.96
SLC1A1P43005 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.07■□□□□ 0.96
SLC1A1P43005 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC1A1P43005 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.07■□□□□ 0.96
SLC1A1P43005 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC1A1P43005 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC1A1P43005 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC1A1P43005 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A1P43005 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC1A1P43005 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A1P43005 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A1P43005 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC1A1P43005 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC1A1P43005 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A1P43005 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A1P43005 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC1A1P43005 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A1P43005 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A1P43005 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC1A1P43005 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC1A1P43005 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC1A1P43005 DUX4L16-201ENST00000555130 1264 ntBASIC21.06■□□□□ 0.96
SLC1A1P43005 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SLC1A1P43005 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.06■□□□□ 0.96
SLC1A1P43005 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SLC1A1P43005 AC125437.2-201ENST00000625180 2167 ntBASIC21.06■□□□□ 0.96
SLC1A1P43005 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A1P43005 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A1P43005 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A1P43005 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 AC016769.1-201ENST00000409132 1010 ntBASIC21.05■□□□□ 0.96
SLC1A1P43005 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC1A1P43005 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 CNN2P6-201ENST00000439038 900 ntBASIC21.05■□□□□ 0.96
SLC1A1P43005 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC1A1P43005 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SLC1A1P43005 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SLC1A1P43005 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SLC1A1P43005 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC1A1P43005 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SLC1A1P43005 AC068338.2-201ENST00000563278 1430 ntBASIC21.04■□□□□ 0.96
SLC1A1P43005 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC1A1P43005 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC1A1P43005 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.04■□□□□ 0.96
SLC1A1P43005 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC1A1P43005 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC1A1P43005 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A1P43005 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC1A1P43005 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.03■□□□□ 0.96
SLC1A1P43005 AC006015.1-201ENST00000429970 570 ntBASIC21.03■□□□□ 0.96
SLC1A1P43005 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.03■□□□□ 0.96
SLC1A1P43005 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC1A1P43005 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC1A1P43005 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A1P43005 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A1P43005 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A1P43005 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC1A1P43005 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SLC1A1P43005 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A1P43005 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A1P43005 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.02■□□□□ 0.96
SLC1A1P43005 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms