Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCNFP41002 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNFP41002 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNFP41002 TERF1P5-201ENST00000477545 1207 ntBASIC20.22■□□□□ 0.83
CCNFP41002 MFSD11-216ENST00000590393 1141 ntBASIC20.22■□□□□ 0.83
CCNFP41002 AL137784.2-201ENST00000607332 1000 ntBASIC20.22■□□□□ 0.83
CCNFP41002 AC011767.1-201ENST00000617410 1153 ntBASIC20.22■□□□□ 0.83
CCNFP41002 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.22■□□□□ 0.83
CCNFP41002 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCNFP41002 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
CCNFP41002 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.21■□□□□ 0.83
CCNFP41002 BX323043.1-201ENST00000641006 1765 ntBASIC20.21■□□□□ 0.83
CCNFP41002 AL158211.5-201ENST00000623583 2518 ntBASIC20.21■□□□□ 0.83
CCNFP41002 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.21■□□□□ 0.83
CCNFP41002 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCNFP41002 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CCNFP41002 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 AC013268.1-206ENST00000638368 961 ntBASIC20.21■□□□□ 0.83
CCNFP41002 AC112229.1-201ENST00000639295 961 ntBASIC20.21■□□□□ 0.83
CCNFP41002 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.21■□□□□ 0.83
CCNFP41002 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CCNFP41002 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCNFP41002 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCNFP41002 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCNFP41002 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCNFP41002 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.2■□□□□ 0.82
CCNFP41002 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCNFP41002 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCNFP41002 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.2■□□□□ 0.82
CCNFP41002 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.2■□□□□ 0.82
CCNFP41002 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.2■□□□□ 0.82
CCNFP41002 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.2■□□□□ 0.82
CCNFP41002 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCNFP41002 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCNFP41002 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.19■□□□□ 0.82
CCNFP41002 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNFP41002 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNFP41002 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNFP41002 AC007322.4-201ENST00000509611 723 ntBASIC20.19■□□□□ 0.82
CCNFP41002 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 AC092437.1-201ENST00000624794 1048 ntBASIC20.19■□□□□ 0.82
CCNFP41002 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCNFP41002 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNFP41002 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.19■□□□□ 0.82
CCNFP41002 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCNFP41002 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCNFP41002 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNFP41002 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCNFP41002 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.18■□□□□ 0.82
CCNFP41002 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.18■□□□□ 0.82
CCNFP41002 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCNFP41002 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms