Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 MET18YIL128W 3099 nt2.79□□□□□ -1.96
MSH4P40965 ARP8YOR141C 2646 nt2.79□□□□□ -1.96
MSH4P40965 RPL42BYHR141C 321 nt2.79□□□□□ -1.96
MSH4P40965 PAU8YAL068C 363 nt2.79□□□□□ -1.96
MSH4P40965 RPL42AYNL162W 321 nt2.79□□□□□ -1.96
MSH4P40965 PAU20YOL161C 363 nt2.79□□□□□ -1.96
MSH4P40965 YOR072W-BYOR072W-B 162 nt2.79□□□□□ -1.96
MSH4P40965 RFX1YLR176C 2436 nt2.79□□□□□ -1.96
MSH4P40965 NIP100YPL174C 2607 nt2.78□□□□□ -1.96
MSH4P40965 SLY1YDR189W 2001 nt2.78□□□□□ -1.96
MSH4P40965 UBP15YMR304W 3693 nt2.78□□□□□ -1.96
MSH4P40965 YDR544CYDR544C 429 nt2.78□□□□□ -1.96
MSH4P40965 YDR182W-AYDR182W-A 204 nt2.77□□□□□ -1.97
MSH4P40965 SCH9YHR205W 2475 nt2.77□□□□□ -1.97
MSH4P40965 YIL071W-AYIL071W-A 477 nt2.76□□□□□ -1.97
MSH4P40965 YMR326CYMR326C 309 nt2.76□□□□□ -1.97
MSH4P40965 YBR174CYBR174C 315 nt2.76□□□□□ -1.97
MSH4P40965 PUT3YKL015W 2940 nt2.76□□□□□ -1.97
MSH4P40965 SPC98YNL126W 2541 nt2.76□□□□□ -1.97
MSH4P40965 MSB1YOR188W 3414 nt2.75□□□□□ -1.97
MSH4P40965 SPO75YLL005C 2607 nt2.75□□□□□ -1.97
MSH4P40965 RPS17AYML024W 411 nt2.75□□□□□ -1.97
MSH4P40965 EDS1YBR033W 2760 nt2.75□□□□□ -1.97
MSH4P40965 COY1YKL179C 2040 nt2.75□□□□□ -1.97
MSH4P40965 TFB5YDR079C-A 219 nt2.74□□□□□ -1.97
MSH4P40965 YHR073W-AYHR073W-A 177 nt2.74□□□□□ -1.97
MSH4P40965 YBL012CYBL012C 402 nt2.74□□□□□ -1.97
MSH4P40965 YCL001W-BYCL001W-B 255 nt2.74□□□□□ -1.97
MSH4P40965 TOF1YNL273W 3717 nt2.74□□□□□ -1.97
MSH4P40965 MNL2YLR057W 2550 nt2.74□□□□□ -1.97
MSH4P40965 TFC8YPL007C 1767 nt2.74□□□□□ -1.97
MSH4P40965 PIG1YLR273C 1947 nt2.74□□□□□ -1.97
MSH4P40965 STB4YMR019W 2850 nt2.73□□□□□ -1.97
MSH4P40965 SWI5YDR146C 2130 nt2.73□□□□□ -1.97
MSH4P40965 INO80YGL150C 4470 nt2.73□□□□□ -1.97
MSH4P40965 MSC6YOR354C 2079 nt2.73□□□□□ -1.97
MSH4P40965 SRP14YDL092W 441 nt2.72□□□□□ -1.97
MSH4P40965 MGM1YOR211C 2646 nt2.72□□□□□ -1.97
MSH4P40965 SCD5YOR329C 2619 nt2.72□□□□□ -1.97
MSH4P40965 YPR097WYPR097W 3222 nt2.72□□□□□ -1.97
MSH4P40965 SPO21YOL091W 1830 nt2.72□□□□□ -1.97
MSH4P40965 VPS8YAL002W 3825 nt2.71□□□□□ -1.98
MSH4P40965 UBR1YGR184C 5853 nt2.71□□□□□ -1.98
MSH4P40965 SWR1YDR334W 4545 nt2.71□□□□□ -1.98
MSH4P40965 BRP1YGL007W 378 nt2.71□□□□□ -1.98
MSH4P40965 YHR071C-AYHR071C-A 321 nt2.71□□□□□ -1.98
MSH4P40965 IRR1YIL026C 3453 nt2.71□□□□□ -1.98
MSH4P40965 YKL165C-AYKL165C-A 234 nt2.7□□□□□ -1.98
MSH4P40965 YBL005W-BYBL005W-B 5268 nt2.7□□□□□ -1.98
MSH4P40965 NCA2YPR155C 1851 nt2.7□□□□□ -1.98
MSH4P40965 LYS14YDR034C 2373 nt2.69□□□□□ -1.98
MSH4P40965 TOR1YJR066W 7413 nt2.69□□□□□ -1.98
MSH4P40965 SVL3YPL032C 2478 nt2.69□□□□□ -1.98
MSH4P40965 MNE1YOR350C 1992 nt2.69□□□□□ -1.98
MSH4P40965 SAP190YKR028W 3102 nt2.68□□□□□ -1.98
MSH4P40965 YDL196WYDL196W 330 nt2.68□□□□□ -1.98
MSH4P40965 EMP24YGL200C 612 nt2.68□□□□□ -1.98
MSH4P40965 YJL022WYJL022W 309 nt2.68□□□□□ -1.98
MSH4P40965 YJL120WYJL120W 324 nt2.68□□□□□ -1.98
MSH4P40965 RPS25BYLR333C 327 nt2.68□□□□□ -1.98
MSH4P40965 YOR314W-AYOR314W-A 111 nt2.68□□□□□ -1.98
MSH4P40965 TRA1YHR099W 11235 nt2.68□□□□□ -1.98
MSH4P40965 YHL015W-AYHL015W-A 84 nt2.67□□□□□ -1.98
MSH4P40965 YOR102WYOR102W 351 nt2.67□□□□□ -1.98
MSH4P40965 YBR221W-AYBR221W-A 105 nt2.67□□□□□ -1.98
MSH4P40965 CSF1YLR087C 8877 nt2.67□□□□□ -1.98
MSH4P40965 SIR4YDR227W 4077 nt2.67□□□□□ -1.98
MSH4P40965 SLM1YIL105C 2061 nt2.66□□□□□ -1.98
MSH4P40965 YDL247W-AYDL247W-A 75 nt2.66□□□□□ -1.98
MSH4P40965 TIM9YEL020W-A 264 nt2.66□□□□□ -1.98
MSH4P40965 YLL019W-AYLL019W-A 93 nt2.66□□□□□ -1.98
MSH4P40965 VPS13YLL040C 9435 nt2.66□□□□□ -1.98
MSH4P40965 ZRG8YER033C 3231 nt2.66□□□□□ -1.98
MSH4P40965 RTT107YHR154W 3213 nt2.66□□□□□ -1.98
MSH4P40965 BNI1YNL271C 5862 nt2.65□□□□□ -1.98
MSH4P40965 VMR1YHL035C 4779 nt2.65□□□□□ -1.98
MSH4P40965 YCR043CYCR043C 384 nt2.65□□□□□ -1.99
MSH4P40965 YHR217CYHR217C 462 nt2.65□□□□□ -1.99
MSH4P40965 YOL098CYOL098C 3114 nt2.65□□□□□ -1.99
MSH4P40965 SET2YJL168C 2202 nt2.65□□□□□ -1.99
MSH4P40965 HAL9YOL089C 3093 nt2.65□□□□□ -1.99
MSH4P40965 FIG4YNL325C 2640 nt2.64□□□□□ -1.99
MSH4P40965 YHR180W-AYHR180W-A 183 nt2.64□□□□□ -1.99
MSH4P40965 PAU18YLL064C 363 nt2.64□□□□□ -1.99
MSH4P40965 PAU6YNR076W 363 nt2.64□□□□□ -1.99
MSH4P40965 ATP7YKL016C 525 nt2.63□□□□□ -1.99
MSH4P40965 STH1YIL126W 4080 nt2.62□□□□□ -1.99
MSH4P40965 PAU3YCR104W 375 nt2.62□□□□□ -1.99
MSH4P40965 SEC16YPL085W 6588 nt2.62□□□□□ -1.99
MSH4P40965 YFR016CYFR016C 3702 nt2.62□□□□□ -1.99
MSH4P40965 RLM1YPL089C 2031 nt2.61□□□□□ -1.99
MSH4P40965 AIM44YPL158C 2277 nt2.61□□□□□ -1.99
MSH4P40965 YOR394C-AYOR394C-A 168 nt2.61□□□□□ -1.99
MSH4P40965 RAV1YJR033C 4074 nt2.61□□□□□ -1.99
MSH4P40965 DNF1YER166W 4716 nt2.6□□□□□ -1.99
MSH4P40965 YDR341CYDR341C 1824 nt2.6□□□□□ -1.99
MSH4P40965 TRL1YJL087C 2484 nt2.59□□□□□ -1.99
MSH4P40965 PMP2YEL017C-A 132 nt2.59□□□□□ -1.99
MSH4P40965 YER053C-AYER053C-A 114 nt2.59□□□□□ -1.99
MSH4P40965 YNL103W-AYNL103W-A 90 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 82.2 ms