Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 YJL120WYJL120W 324 nt2.24□□□□□ -2.05
SDP1P40479 YOR345CYOR345C 351 nt2.24□□□□□ -2.05
SDP1P40479 CSF1YLR087C 8877 nt2.24□□□□□ -2.05
SDP1P40479 EDS1YBR033W 2760 nt2.23□□□□□ -2.05
SDP1P40479 HSH155YMR288W 2916 nt2.23□□□□□ -2.05
SDP1P40479 RPS17AYML024W 411 nt2.23□□□□□ -2.05
SDP1P40479 KTI11YBL071W-A 249 nt2.23□□□□□ -2.05
SDP1P40479 YNL205CYNL205C 423 nt2.23□□□□□ -2.05
SDP1P40479 CAT2YML042W 2013 nt2.23□□□□□ -2.05
SDP1P40479 RAV1YJR033C 4074 nt2.23□□□□□ -2.05
SDP1P40479 PDR11YIL013C 4236 nt2.23□□□□□ -2.05
SDP1P40479 CHC1YGL206C 4962 nt2.23□□□□□ -2.05
SDP1P40479 TUS1YLR425W 3924 nt2.23□□□□□ -2.05
SDP1P40479 RAD34YDR314C 2079 nt2.22□□□□□ -2.05
SDP1P40479 MLH1YMR167W 2310 nt2.22□□□□□ -2.05
SDP1P40479 tW(CCA)G1tW(CCA)G1 72 nt2.22□□□□□ -2.05
SDP1P40479 tW(CCA)G2tW(CCA)G2 72 nt2.22□□□□□ -2.05
SDP1P40479 tW(CCA)JtW(CCA)J 72 nt2.22□□□□□ -2.05
SDP1P40479 tW(CCA)KtW(CCA)K 72 nt2.22□□□□□ -2.05
SDP1P40479 tW(CCA)MtW(CCA)M 72 nt2.22□□□□□ -2.05
SDP1P40479 tW(CCA)PtW(CCA)P 72 nt2.22□□□□□ -2.05
SDP1P40479 VPS8YAL002W 3825 nt2.22□□□□□ -2.05
SDP1P40479 YOR108C-AYOR108C-A 210 nt2.22□□□□□ -2.05
SDP1P40479 NAM7YMR080C 2916 nt2.22□□□□□ -2.05
SDP1P40479 SPF1YEL031W 3648 nt2.21□□□□□ -2.06
SDP1P40479 RPL33BYOR234C 324 nt2.21□□□□□ -2.06
SDP1P40479 YOR343W-BYOR343W-B 5313 nt2.21□□□□□ -2.06
SDP1P40479 SVL3YPL032C 2478 nt2.21□□□□□ -2.06
SDP1P40479 CUL3YGR003W 2235 nt2.21□□□□□ -2.06
SDP1P40479 NOC3YLR002C 1992 nt2.2□□□□□ -2.06
SDP1P40479 MAK10YEL053C 2202 nt2.2□□□□□ -2.06
SDP1P40479 YHR032W-AYHR032W-A 180 nt2.2□□□□□ -2.06
SDP1P40479 YOR161W-BYOR161W-B 261 nt2.2□□□□□ -2.06
SDP1P40479 ENV11YGR071C 2583 nt2.2□□□□□ -2.06
SDP1P40479 MAD1YGL086W 2250 nt2.2□□□□□ -2.06
SDP1P40479 TRL1YJL087C 2484 nt2.19□□□□□ -2.06
SDP1P40479 YDR341CYDR341C 1824 nt2.19□□□□□ -2.06
SDP1P40479 PMP1YCR024C-A 123 nt2.19□□□□□ -2.06
SDP1P40479 RPL31AYDL075W 342 nt2.19□□□□□ -2.06
SDP1P40479 YEL073CYEL073C 324 nt2.19□□□□□ -2.06
SDP1P40479 YIR044CYIR044C 186 nt2.19□□□□□ -2.06
SDP1P40479 MBB1YJL199C 327 nt2.19□□□□□ -2.06
SDP1P40479 STE11YLR362W 2154 nt2.19□□□□□ -2.06
SDP1P40479 PAU3YCR104W 375 nt2.18□□□□□ -2.06
SDP1P40479 YLL019W-AYLL019W-A 93 nt2.18□□□□□ -2.06
SDP1P40479 snR85snR85 171 nt2.17□□□□□ -2.06
SDP1P40479 TIM9YEL020W-A 264 nt2.17□□□□□ -2.06
SDP1P40479 YIL020C-AYIL020C-A 339 nt2.17□□□□□ -2.06
SDP1P40479 YLL007CYLL007C 1998 nt2.17□□□□□ -2.06
SDP1P40479 APL2YKL135C 2181 nt2.17□□□□□ -2.06
SDP1P40479 CDC60YPL160W 3273 nt2.16□□□□□ -2.06
SDP1P40479 YDL196WYDL196W 330 nt2.16□□□□□ -2.06
SDP1P40479 BRP1YGL007W 378 nt2.16□□□□□ -2.06
SDP1P40479 snR48snR48 113 nt2.16□□□□□ -2.06
SDP1P40479 YHR210CYHR210C 1026 nt2.15□□□□□ -2.07
SDP1P40479 YIL156W-BYIL156W-B 222 nt2.15□□□□□ -2.07
SDP1P40479 NCA2YPR155C 1851 nt2.15□□□□□ -2.07
SDP1P40479 MLH3YPL164C 2148 nt2.15□□□□□ -2.07
SDP1P40479 MSH5YDL154W 2706 nt2.15□□□□□ -2.07
SDP1P40479 RSE1YML049C 4086 nt2.15□□□□□ -2.07
SDP1P40479 DGR2YKL121W 2559 nt2.14□□□□□ -2.07
SDP1P40479 SYH1YPL105C 2550 nt2.14□□□□□ -2.07
SDP1P40479 COY1YKL179C 2040 nt2.14□□□□□ -2.07
SDP1P40479 tC(GCA)BtC(GCA)B 72 nt2.14□□□□□ -2.07
SDP1P40479 tC(GCA)GtC(GCA)G 72 nt2.14□□□□□ -2.07
SDP1P40479 tC(GCA)P1tC(GCA)P1 72 nt2.14□□□□□ -2.07
SDP1P40479 tC(GCA)P2tC(GCA)P2 72 nt2.14□□□□□ -2.07
SDP1P40479 YKR075W-AYKR075W-A 270 nt2.14□□□□□ -2.07
SDP1P40479 YPR097WYPR097W 3222 nt2.14□□□□□ -2.07
SDP1P40479 PHO91YNR013C 2685 nt2.13□□□□□ -2.07
SDP1P40479 ATG11YPR049C 3537 nt2.13□□□□□ -2.07
SDP1P40479 AIM44YPL158C 2277 nt2.13□□□□□ -2.07
SDP1P40479 PET309YLR067C 2898 nt2.13□□□□□ -2.07
SDP1P40479 AHC1YOR023C 1701 nt2.13□□□□□ -2.07
SDP1P40479 SCD5YOR329C 2619 nt2.13□□□□□ -2.07
SDP1P40479 PIP2YOR363C 2991 nt2.13□□□□□ -2.07
SDP1P40479 FIG4YNL325C 2640 nt2.12□□□□□ -2.07
SDP1P40479 YFR016CYFR016C 3702 nt2.12□□□□□ -2.07
SDP1P40479 RPL37BYDR500C 267 nt2.12□□□□□ -2.07
SDP1P40479 YBL053WYBL053W 375 nt2.12□□□□□ -2.07
SDP1P40479 PRP42YDR235W 1635 nt2.11□□□□□ -2.07
SDP1P40479 YKL165C-AYKL165C-A 234 nt2.11□□□□□ -2.07
SDP1P40479 UBP1YDL122W 2430 nt2.11□□□□□ -2.07
SDP1P40479 PTP2YOR208W 2253 nt2.11□□□□□ -2.07
SDP1P40479 YEF3YLR249W 3135 nt2.1□□□□□ -2.07
SDP1P40479 AGC1YPR021C 2709 nt2.1□□□□□ -2.07
SDP1P40479 NEW1YPL226W 3591 nt2.1□□□□□ -2.07
SDP1P40479 HMI1YOL095C 2121 nt2.1□□□□□ -2.07
SDP1P40479 PIG1YLR273C 1947 nt2.1□□□□□ -2.07
SDP1P40479 MSB1YOR188W 3414 nt2.1□□□□□ -2.07
SDP1P40479 RTT107YHR154W 3213 nt2.1□□□□□ -2.07
SDP1P40479 CTR9YOL145C 3234 nt2.09□□□□□ -2.07
SDP1P40479 YHR180W-AYHR180W-A 183 nt2.09□□□□□ -2.07
SDP1P40479 YOL019W-AYOL019W-A 153 nt2.09□□□□□ -2.07
SDP1P40479 DNF1YER166W 4716 nt2.09□□□□□ -2.08
SDP1P40479 KOG1YHR186C 4674 nt2.09□□□□□ -2.08
SDP1P40479 TOF1YNL273W 3717 nt2.08□□□□□ -2.08
SDP1P40479 SGS1YMR190C 4344 nt2.08□□□□□ -2.08
SDP1P40479 snR70snR70 164 nt2.08□□□□□ -2.08
SDP1P40479 VPS13YLL040C 9435 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 47.1 ms