Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 INP2YMR163C 2118 nt1.7□□□□□ -2.14
RPH1P39956 YCR102W-AYCR102W-A 198 nt1.69□□□□□ -2.14
RPH1P39956 snR72snR72 98 nt1.69□□□□□ -2.14
RPH1P39956 YOR008C-AYOR008C-A 225 nt1.69□□□□□ -2.14
RPH1P39956 HCS1YKL017C 2052 nt1.68□□□□□ -2.14
RPH1P39956 YDR003W-AYDR003W-A 123 nt1.68□□□□□ -2.14
RPH1P39956 RPL37BYDR500C 267 nt1.68□□□□□ -2.14
RPH1P39956 SPG3YDR504C 384 nt1.68□□□□□ -2.14
RPH1P39956 YGR265WYGR265W 411 nt1.68□□□□□ -2.14
RPH1P39956 SYH1YPL105C 2550 nt1.68□□□□□ -2.14
RPH1P39956 SLY1YDR189W 2001 nt1.67□□□□□ -2.14
RPH1P39956 SSS1YDR086C 243 nt1.67□□□□□ -2.14
RPH1P39956 YGL041CYGL041C 204 nt1.67□□□□□ -2.14
RPH1P39956 snR49snR49 165 nt1.67□□□□□ -2.14
RPH1P39956 YOR093CYOR093C 4947 nt1.67□□□□□ -2.14
RPH1P39956 ZRG17YNR039C 1818 nt1.67□□□□□ -2.14
RPH1P39956 MDM20YOL076W 2391 nt1.67□□□□□ -2.14
RPH1P39956 PKH3YDR466W 2697 nt1.66□□□□□ -2.14
RPH1P39956 SCW11YGL028C 1629 nt1.66□□□□□ -2.14
RPH1P39956 PET309YLR067C 2898 nt1.66□□□□□ -2.14
RPH1P39956 FIG2YCR089W 4830 nt1.66□□□□□ -2.14
RPH1P39956 HSL1YKL101W 4557 nt1.66□□□□□ -2.14
RPH1P39956 NAM7YMR080C 2916 nt1.66□□□□□ -2.14
RPH1P39956 SDH2YLL041C 801 nt1.66□□□□□ -2.14
RPH1P39956 TFC8YPL007C 1767 nt1.66□□□□□ -2.14
RPH1P39956 JLP2YMR132C 627 nt1.65□□□□□ -2.15
RPH1P39956 YBR064WYBR064W 429 nt1.65□□□□□ -2.15
RPH1P39956 YBR174CYBR174C 315 nt1.65□□□□□ -2.15
RPH1P39956 YLL032CYLL032C 2478 nt1.64□□□□□ -2.15
RPH1P39956 BPH1YCR032W 6504 nt1.64□□□□□ -2.15
RPH1P39956 MMS22YLR320W 4365 nt1.64□□□□□ -2.15
RPH1P39956 SRP14YDL092W 441 nt1.64□□□□□ -2.15
RPH1P39956 ANS1YHR126C 480 nt1.64□□□□□ -2.15
RPH1P39956 LCD1YDR499W 2244 nt1.64□□□□□ -2.15
RPH1P39956 MYO4YAL029C 4416 nt1.63□□□□□ -2.15
RPH1P39956 CAT8YMR280C 4302 nt1.63□□□□□ -2.15
RPH1P39956 YER088C-AYER088C-A 324 nt1.63□□□□□ -2.15
RPH1P39956 ABF2YMR072W 552 nt1.63□□□□□ -2.15
RPH1P39956 ZIP1YDR285W 2628 nt1.63□□□□□ -2.15
RPH1P39956 DCP2YNL118C 2913 nt1.63□□□□□ -2.15
RPH1P39956 SPT21YMR179W 2277 nt1.63□□□□□ -2.15
RPH1P39956 YCR087C-AYCR087C-A 462 nt1.62□□□□□ -2.15
RPH1P39956 CDC36YDL165W 576 nt1.62□□□□□ -2.15
RPH1P39956 INA22YIR024C 651 nt1.62□□□□□ -2.15
RPH1P39956 COA6YMR244C-A 315 nt1.62□□□□□ -2.15
RPH1P39956 CSE2YNR010W 450 nt1.62□□□□□ -2.15
RPH1P39956 VIK1YPL253C 1944 nt1.62□□□□□ -2.15
RPH1P39956 YNL028WYNL028W 318 nt1.61□□□□□ -2.15
RPH1P39956 MSC6YOR354C 2079 nt1.61□□□□□ -2.15
RPH1P39956 MPT5YGL178W 2580 nt1.61□□□□□ -2.15
RPH1P39956 MAK10YEL053C 2202 nt1.6□□□□□ -2.15
RPH1P39956 SBE22YHR103W 2559 nt1.6□□□□□ -2.15
RPH1P39956 YOL155W-AYOL155W-A 135 nt1.6□□□□□ -2.15
RPH1P39956 MSH3YCR092C 3057 nt1.6□□□□□ -2.15
RPH1P39956 HIR3YJR140C 4947 nt1.59□□□□□ -2.15
RPH1P39956 YJL197C-AYJL197C-A 282 nt1.59□□□□□ -2.15
RPH1P39956 YOR015WYOR015W 360 nt1.59□□□□□ -2.15
RPH1P39956 CHS1YNL192W 3396 nt1.59□□□□□ -2.16
RPH1P39956 MSH5YDL154W 2706 nt1.59□□□□□ -2.16
RPH1P39956 SPC98YNL126W 2541 nt1.59□□□□□ -2.16
RPH1P39956 IRA1YBR140C 9279 nt1.58□□□□□ -2.16
RPH1P39956 snR55snR55 98 nt1.58□□□□□ -2.16
RPH1P39956 YGL052WYGL052W 306 nt1.58□□□□□ -2.16
RPH1P39956 YLR120W-AYLR120W-A 102 nt1.58□□□□□ -2.16
RPH1P39956 YMR172C-AYMR172C-A 384 nt1.58□□□□□ -2.16
RPH1P39956 YOL160WYOL160W 342 nt1.58□□□□□ -2.16
RPH1P39956 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
RPH1P39956 NIP100YPL174C 2607 nt1.58□□□□□ -2.16
RPH1P39956 SAS3YBL052C 2496 nt1.58□□□□□ -2.16
RPH1P39956 ADR1YDR216W 3972 nt1.57□□□□□ -2.16
RPH1P39956 YCK3YER123W 1575 nt1.57□□□□□ -2.16
RPH1P39956 tM(CAU)Q1tM(CAU)Q1 76 nt1.57□□□□□ -2.16
RPH1P39956 BLI1YKL061W 342 nt1.57□□□□□ -2.16
RPH1P39956 YMR242W-AYMR242W-A 90 nt1.57□□□□□ -2.16
RPH1P39956 YMR321CYMR321C 318 nt1.57□□□□□ -2.16
RPH1P39956 IRE1YHR079C 3348 nt1.57□□□□□ -2.16
RPH1P39956 YJR039WYJR039W 3366 nt1.57□□□□□ -2.16
RPH1P39956 ZIP2YGL249W 2115 nt1.57□□□□□ -2.16
RPH1P39956 CTR9YOL145C 3234 nt1.57□□□□□ -2.16
RPH1P39956 TDA9YML081W 3756 nt1.56□□□□□ -2.16
RPH1P39956 RLM1YPL089C 2031 nt1.56□□□□□ -2.16
RPH1P39956 YDR182W-AYDR182W-A 204 nt1.56□□□□□ -2.16
RPH1P39956 MLH3YPL164C 2148 nt1.56□□□□□ -2.16
RPH1P39956 NPR2YEL062W 1848 nt1.56□□□□□ -2.16
RPH1P39956 ENV11YGR071C 2583 nt1.55□□□□□ -2.16
RPH1P39956 PDE2YOR360C 1581 nt1.55□□□□□ -2.16
RPH1P39956 MSH6YDR097C 3729 nt1.55□□□□□ -2.16
RPH1P39956 PAU2YEL049W 363 nt1.55□□□□□ -2.16
RPH1P39956 HMI1YOL095C 2121 nt1.55□□□□□ -2.16
RPH1P39956 VPS54YDR027C 2670 nt1.54□□□□□ -2.16
RPH1P39956 GPG1YGL121C 381 nt1.54□□□□□ -2.16
RPH1P39956 PFD1YJL179W 330 nt1.54□□□□□ -2.16
RPH1P39956 YMR307C-AYMR307C-A 195 nt1.54□□□□□ -2.16
RPH1P39956 APL2YKL135C 2181 nt1.54□□□□□ -2.16
RPH1P39956 RPL34BYIL052C 366 nt1.53□□□□□ -2.16
RPH1P39956 YMR046W-AYMR046W-A 129 nt1.53□□□□□ -2.16
RPH1P39956 IES4YOR189W 351 nt1.53□□□□□ -2.16
RPH1P39956 CDC31YOR257W 486 nt1.53□□□□□ -2.16
RPH1P39956 TBS1YBR150C 3285 nt1.53□□□□□ -2.16
RPH1P39956 FRK1YPL141C 2598 nt1.53□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 54.2 ms