Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.42■□□□□ 0.54
SHC1P29353 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.42■□□□□ 0.54
SHC1P29353 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.42■□□□□ 0.54
SHC1P29353 AC098934.4-201ENST00000564127 592 ntBASIC18.42■□□□□ 0.54
SHC1P29353 AL138781.1-201ENST00000566567 1274 ntBASIC18.42■□□□□ 0.54
SHC1P29353 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 CYP2T3P-201ENST00000601990 817 ntBASIC18.42■□□□□ 0.54
SHC1P29353 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
SHC1P29353 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.42■□□□□ 0.54
SHC1P29353 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.42■□□□□ 0.54
SHC1P29353 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SHC1P29353 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SHC1P29353 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SHC1P29353 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 FP700111.2-201ENST00000619190 1892 ntBASIC18.41■□□□□ 0.54
SHC1P29353 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SHC1P29353 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHC1P29353 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC1P29353 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC1P29353 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC1P29353 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.41■□□□□ 0.54
SHC1P29353 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.41■□□□□ 0.54
SHC1P29353 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC1P29353 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.41■□□□□ 0.54
SHC1P29353 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 AC100791.3-201ENST00000617619 330 ntBASIC18.41■□□□□ 0.54
SHC1P29353 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.41■□□□□ 0.54
SHC1P29353 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.41■□□□□ 0.54
SHC1P29353 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SHC1P29353 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SHC1P29353 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC1P29353 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC1P29353 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHC1P29353 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SHC1P29353 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
SHC1P29353 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHC1P29353 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC1P29353 MIPEPP3-201ENST00000412105 444 ntBASIC18.4■□□□□ 0.54
SHC1P29353 BX276092.2-201ENST00000417668 665 ntBASIC18.4■□□□□ 0.54
SHC1P29353 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.4■□□□□ 0.54
SHC1P29353 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.4■□□□□ 0.54
SHC1P29353 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.4■□□□□ 0.54
SHC1P29353 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.4■□□□□ 0.54
SHC1P29353 MIR2861-201ENST00000636310 90 ntBASIC18.4■□□□□ 0.54
SHC1P29353 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SHC1P29353 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC1P29353 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SHC1P29353 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.4■□□□□ 0.54
SHC1P29353 AC087633.2-202ENST00000565166 1439 ntBASIC18.4■□□□□ 0.54
SHC1P29353 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC1P29353 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHC1P29353 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SHC1P29353 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHC1P29353 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC1P29353 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC1P29353 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC1P29353 SLC29A4P1-201ENST00000398760 971 ntBASIC18.39■□□□□ 0.53
SHC1P29353 AL355802.2-201ENST00000402069 882 ntBASIC18.39■□□□□ 0.53
SHC1P29353 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.39■□□□□ 0.53
SHC1P29353 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.39■□□□□ 0.53
SHC1P29353 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC1P29353 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SHC1P29353 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHC1P29353 AC007225.1-201ENST00000566331 1836 ntBASIC18.39■□□□□ 0.53
SHC1P29353 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHC1P29353 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHC1P29353 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.39■□□□□ 0.53
SHC1P29353 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.39■□□□□ 0.53
SHC1P29353 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.39■□□□□ 0.53
SHC1P29353 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SHC1P29353 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC1P29353 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.38■□□□□ 0.53
SHC1P29353 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.38■□□□□ 0.53
SHC1P29353 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms