Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 ASE1YOR058C 2658 nt-0.55□□□□□ -2.5
XRN1P22147 YLR101CYLR101C 396 nt-0.56□□□□□ -2.5
XRN1P22147 GPG1YGL121C 381 nt-0.57□□□□□ -2.5
XRN1P22147 YIR030W-AYIR030W-A 384 nt-0.57□□□□□ -2.5
XRN1P22147 RPS16AYMR143W 432 nt-0.57□□□□□ -2.5
XRN1P22147 CSM4YPL200W 471 nt-0.57□□□□□ -2.5
XRN1P22147 YEL073CYEL073C 324 nt-0.58□□□□□ -2.5
XRN1P22147 TDA2YER071C 381 nt-0.58□□□□□ -2.5
XRN1P22147 RPL29YFR032C-A 180 nt-0.59□□□□□ -2.5
XRN1P22147 LEE1YPL054W 906 nt-0.59□□□□□ -2.5
XRN1P22147 YDL152WYDL152W 366 nt-0.59□□□□□ -2.5
XRN1P22147 DAD1YDR016C 285 nt-0.59□□□□□ -2.5
XRN1P22147 RPS26AYGL189C 360 nt-0.6□□□□□ -2.51
XRN1P22147 tT(UGU)G1tT(UGU)G1 72 nt-0.6□□□□□ -2.51
XRN1P22147 tT(UGU)G2tT(UGU)G2 72 nt-0.6□□□□□ -2.51
XRN1P22147 tT(UGU)PtT(UGU)P 72 nt-0.6□□□□□ -2.51
XRN1P22147 CMS1YLR003C 876 nt-0.6□□□□□ -2.51
XRN1P22147 YPL185WYPL185W 396 nt-0.6□□□□□ -2.51
XRN1P22147 YAL067W-AYAL067W-A 228 nt-0.61□□□□□ -2.51
XRN1P22147 AFB1YLR040C 675 nt-0.62□□□□□ -2.51
XRN1P22147 YER038W-AYER038W-A 381 nt-0.63□□□□□ -2.51
XRN1P22147 OLI1Q0130 231 nt-0.63□□□□□ -2.51
XRN1P22147 YJL086CYJL086C 369 nt-0.63□□□□□ -2.51
XRN1P22147 YCR038W-AYCR038W-A 126 nt-0.64□□□□□ -2.51
XRN1P22147 AI5_BETAQ0075 1065 nt-0.64□□□□□ -2.51
XRN1P22147 YOL118CYOL118C 309 nt-0.64□□□□□ -2.51
XRN1P22147 snR128snR128 126 nt-0.64□□□□□ -2.51
XRN1P22147 BI3Q0115 1554 nt-0.64□□□□□ -2.51
XRN1P22147 YDR344CYDR344C 444 nt-0.64□□□□□ -2.51
XRN1P22147 MMS21YEL019C 804 nt-0.64□□□□□ -2.51
XRN1P22147 MAM33YIL070C 801 nt-0.64□□□□□ -2.51
XRN1P22147 COG6YNL041C 2520 nt-0.65□□□□□ -2.51
XRN1P22147 YCR022CYCR022C 345 nt-0.65□□□□□ -2.51
XRN1P22147 OST4YDL232W 111 nt-0.65□□□□□ -2.51
XRN1P22147 LSO2YGR169C-A 279 nt-0.65□□□□□ -2.51
XRN1P22147 ECM9YKR004C 1134 nt-0.65□□□□□ -2.51
XRN1P22147 snR24snR24 89 nt-0.65□□□□□ -2.51
XRN1P22147 LSM4YER112W 564 nt-0.66□□□□□ -2.52
XRN1P22147 PRP21YJL203W 843 nt-0.66□□□□□ -2.52
XRN1P22147 GSP1YLR293C 660 nt-0.66□□□□□ -2.52
XRN1P22147 CDC33YOL139C 642 nt-0.66□□□□□ -2.52
XRN1P22147 MCM10YIL150C 1716 nt-0.66□□□□□ -2.52
XRN1P22147 YGL042CYGL042C 306 nt-0.67□□□□□ -2.52
XRN1P22147 YPL044CYPL044C 549 nt-0.67□□□□□ -2.52
XRN1P22147 ATP20YPR020W 348 nt-0.67□□□□□ -2.52
XRN1P22147 YKU70YMR284W 1809 nt-0.67□□□□□ -2.52
XRN1P22147 HTB1YDR224C 396 nt-0.68□□□□□ -2.52
XRN1P22147 PFS1YHR185C 714 nt-0.68□□□□□ -2.52
XRN1P22147 YDR008CYDR008C 351 nt-0.69□□□□□ -2.52
XRN1P22147 RSM18YER050C 417 nt-0.69□□□□□ -2.52
XRN1P22147 YLL032CYLL032C 2478 nt-0.7□□□□□ -2.52
XRN1P22147 TFB6YOR352W 1032 nt-0.7□□□□□ -2.52
XRN1P22147 YBR223W-AYBR223W-A 120 nt-0.7□□□□□ -2.52
XRN1P22147 THG1YGR024C 714 nt-0.71□□□□□ -2.52
XRN1P22147 GIM5YML094W 492 nt-0.71□□□□□ -2.52
XRN1P22147 NIP1YMR309C 2439 nt-0.71□□□□□ -2.52
XRN1P22147 YFR057WYFR057W 456 nt-0.72□□□□□ -2.52
XRN1P22147 YMR158C-AYMR158C-A 138 nt-0.72□□□□□ -2.52
XRN1P22147 PET20YPL159C 762 nt-0.72□□□□□ -2.52
XRN1P22147 YPR160W-AYPR160W-A 81 nt-0.72□□□□□ -2.52
XRN1P22147 RPS7BYNL096C 573 nt-0.73□□□□□ -2.53
XRN1P22147 YNL146WYNL146W 303 nt-0.73□□□□□ -2.53
XRN1P22147 YGL204CYGL204C 306 nt-0.74□□□□□ -2.53
XRN1P22147 NFU1YKL040C 771 nt-0.74□□□□□ -2.53
XRN1P22147 MRPL31YKL138C 396 nt-0.74□□□□□ -2.53
XRN1P22147 RPS10BYMR230W 318 nt-0.74□□□□□ -2.53
XRN1P22147 YPR099CYPR099C 357 nt-0.74□□□□□ -2.53
XRN1P22147 YLR271WYLR271W 825 nt-0.74□□□□□ -2.53
XRN1P22147 RUF20RUF20 443 nt-0.74□□□□□ -2.53
XRN1P22147 COY1YKL179C 2040 nt-0.75□□□□□ -2.53
XRN1P22147 YER158W-AYER158W-A 216 nt-0.75□□□□□ -2.53
XRN1P22147 YLR146W-AYLR146W-A 189 nt-0.76□□□□□ -2.53
XRN1P22147 YMR141W-AYMR141W-A 225 nt-0.76□□□□□ -2.53
XRN1P22147 BI4Q0120 1917 nt-0.76□□□□□ -2.53
XRN1P22147 YBR064WYBR064W 429 nt-0.77□□□□□ -2.53
XRN1P22147 YJR079WYJR079W 330 nt-0.78□□□□□ -2.53
XRN1P22147 HTB2YBL002W 396 nt-0.78□□□□□ -2.53
XRN1P22147 PAN3YKL025C 2040 nt-0.78□□□□□ -2.53
XRN1P22147 YLR399W-AYLR399W-A 105 nt-0.79□□□□□ -2.54
XRN1P22147 snR79snR79 84 nt-0.8□□□□□ -2.54
XRN1P22147 YKL023C-AYKL023C-A 228 nt-0.8□□□□□ -2.54
XRN1P22147 snR161snR161 161 nt-0.8□□□□□ -2.54
XRN1P22147 RUB1YDR139C 234 nt-0.81□□□□□ -2.54
XRN1P22147 SUS1YBR111W-A 291 nt-0.82□□□□□ -2.54
XRN1P22147 ZIP2YGL249W 2115 nt-0.83□□□□□ -2.54
XRN1P22147 YJR140W-AYJR140W-A 150 nt-0.83□□□□□ -2.54
XRN1P22147 VPS63YLR261C 327 nt-0.83□□□□□ -2.54
XRN1P22147 YMR290W-AYMR290W-A 348 nt-0.83□□□□□ -2.54
XRN1P22147 YNL171CYNL171C 369 nt-0.83□□□□□ -2.54
XRN1P22147 snR44snR44 211 nt-0.83□□□□□ -2.54
XRN1P22147 YJR141WYJR141W 1044 nt-0.84□□□□□ -2.54
XRN1P22147 YMR153C-AYMR153C-A 336 nt-0.84□□□□□ -2.54
XRN1P22147 PAA1YDR071C 576 nt-0.84□□□□□ -2.54
XRN1P22147 RSM23YGL129C 1353 nt-0.85□□□□□ -2.55
XRN1P22147 SDS22YKL193C 1017 nt-0.85□□□□□ -2.55
XRN1P22147 15S_rRNA15S_rRNA 1649 nt-0.86□□□□□ -2.55
XRN1P22147 YER076W-AYER076W-A 348 nt-0.86□□□□□ -2.55
XRN1P22147 DFG10YIL049W 762 nt-0.87□□□□□ -2.55
XRN1P22147 YPL119C-AYPL119C-A 264 nt-0.87□□□□□ -2.55
XRN1P22147 YJL135WYJL135W 318 nt-0.88□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 169.6 ms