Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
XRCC1P18887 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC1P18887 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC1P18887 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
XRCC1P18887 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC1P18887 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.04■□□□□ 0.8
XRCC1P18887 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.04■□□□□ 0.8
XRCC1P18887 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
XRCC1P18887 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
XRCC1P18887 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.04■□□□□ 0.8
XRCC1P18887 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC1P18887 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.03■□□□□ 0.8
XRCC1P18887 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.03■□□□□ 0.8
XRCC1P18887 KRT17P1-201ENST00000399211 1546 ntBASIC20.03■□□□□ 0.8
XRCC1P18887 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.03■□□□□ 0.8
XRCC1P18887 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
XRCC1P18887 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 KRT18P68-201ENST00000392293 1000 ntBASIC20.03■□□□□ 0.8
XRCC1P18887 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 DUSP5P2-201ENST00000426873 1033 ntBASIC20.03■□□□□ 0.8
XRCC1P18887 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
XRCC1P18887 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
XRCC1P18887 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.03■□□□□ 0.8
XRCC1P18887 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
XRCC1P18887 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.03■□□□□ 0.8
XRCC1P18887 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC1P18887 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
XRCC1P18887 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
XRCC1P18887 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
XRCC1P18887 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.02■□□□□ 0.8
XRCC1P18887 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.02■□□□□ 0.8
XRCC1P18887 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.02■□□□□ 0.8
XRCC1P18887 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.02■□□□□ 0.8
XRCC1P18887 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
XRCC1P18887 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.02■□□□□ 0.8
XRCC1P18887 CYP21A1P-202ENST00000354927 1481 ntBASIC20.02■□□□□ 0.8
XRCC1P18887 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC1P18887 AC027702.1-201ENST00000563810 1770 ntBASIC20.02■□□□□ 0.8
XRCC1P18887 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
XRCC1P18887 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRCC1P18887 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
XRCC1P18887 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRCC1P18887 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.02■□□□□ 0.79
XRCC1P18887 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.02■□□□□ 0.79
XRCC1P18887 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
XRCC1P18887 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.01■□□□□ 0.79
XRCC1P18887 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.01■□□□□ 0.79
XRCC1P18887 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.01■□□□□ 0.79
XRCC1P18887 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
XRCC1P18887 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 AC083880.1-201ENST00000608266 535 ntBASIC20.01■□□□□ 0.79
XRCC1P18887 AL589743.5-201ENST00000616611 1050 ntBASIC20.01■□□□□ 0.79
XRCC1P18887 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.01■□□□□ 0.79
XRCC1P18887 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.01■□□□□ 0.79
XRCC1P18887 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.01■□□□□ 0.79
XRCC1P18887 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
XRCC1P18887 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XRCC1P18887 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20■□□□□ 0.79
XRCC1P18887 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20■□□□□ 0.79
XRCC1P18887 OR2A1-AS1-201ENST00000462305 773 ntBASIC20■□□□□ 0.79
XRCC1P18887 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20■□□□□ 0.79
XRCC1P18887 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20■□□□□ 0.79
XRCC1P18887 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
XRCC1P18887 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20■□□□□ 0.79
XRCC1P18887 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
XRCC1P18887 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XRCC1P18887 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20■□□□□ 0.79
XRCC1P18887 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20■□□□□ 0.79
XRCC1P18887 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20■□□□□ 0.79
XRCC1P18887 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
XRCC1P18887 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
XRCC1P18887 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
XRCC1P18887 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.99■□□□□ 0.79
XRCC1P18887 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
XRCC1P18887 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
XRCC1P18887 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms