Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATF4P18848 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.76■□□□□ 0.27
ATF4P18848 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.76■□□□□ 0.27
ATF4P18848 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATF4P18848 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.76■□□□□ 0.27
ATF4P18848 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.76■□□□□ 0.27
ATF4P18848 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 AL117332.1-201ENST00000622628 974 ntBASIC16.76■□□□□ 0.27
ATF4P18848 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.76■□□□□ 0.27
ATF4P18848 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.76■□□□□ 0.27
ATF4P18848 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATF4P18848 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ATF4P18848 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.76■□□□□ 0.27
ATF4P18848 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATF4P18848 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF4P18848 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATF4P18848 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.75■□□□□ 0.27
ATF4P18848 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.75■□□□□ 0.27
ATF4P18848 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATF4P18848 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.75■□□□□ 0.27
ATF4P18848 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATF4P18848 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.75■□□□□ 0.27
ATF4P18848 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.75■□□□□ 0.27
ATF4P18848 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.75■□□□□ 0.27
ATF4P18848 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.75■□□□□ 0.27
ATF4P18848 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATF4P18848 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
ATF4P18848 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATF4P18848 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.74■□□□□ 0.27
ATF4P18848 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.74■□□□□ 0.27
ATF4P18848 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF4P18848 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.74■□□□□ 0.27
ATF4P18848 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ATF4P18848 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATF4P18848 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATF4P18848 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
ATF4P18848 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATF4P18848 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATF4P18848 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.73■□□□□ 0.27
ATF4P18848 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATF4P18848 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.73■□□□□ 0.27
ATF4P18848 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.73■□□□□ 0.27
ATF4P18848 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.73■□□□□ 0.27
ATF4P18848 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.73■□□□□ 0.27
ATF4P18848 AC131281.2-201ENST00000520478 145 ntBASIC16.73■□□□□ 0.27
ATF4P18848 AL139246.5-201ENST00000606645 996 ntBASIC16.73■□□□□ 0.27
ATF4P18848 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ATF4P18848 HTR7P1-202ENST00000624664 4411 ntBASIC16.73■□□□□ 0.27
ATF4P18848 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ATF4P18848 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.73■□□□□ 0.27
ATF4P18848 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ATF4P18848 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ATF4P18848 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms