Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 BCL2-203ENST00000589955 5011 ntBASIC16.31■□□□□ 0.2
DEFA4P12838 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DEFA4P12838 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DEFA4P12838 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
DEFA4P12838 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.31■□□□□ 0.2
DEFA4P12838 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DEFA4P12838 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DEFA4P12838 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DEFA4P12838 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA4P12838 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.3■□□□□ 0.2
DEFA4P12838 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.3■□□□□ 0.2
DEFA4P12838 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA4P12838 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.3■□□□□ 0.2
DEFA4P12838 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA4P12838 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.3■□□□□ 0.2
DEFA4P12838 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DEFA4P12838 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DEFA4P12838 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.3■□□□□ 0.2
DEFA4P12838 AC011484.1-201ENST00000377652 1995 ntBASIC16.29■□□□□ 0.2
DEFA4P12838 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.29■□□□□ 0.2
DEFA4P12838 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 AC099778.1-201ENST00000568593 1911 ntBASIC16.29■□□□□ 0.2
DEFA4P12838 FP700111.2-201ENST00000619190 1892 ntBASIC16.29■□□□□ 0.2
DEFA4P12838 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DEFA4P12838 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.29■□□□□ 0.2
DEFA4P12838 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.29■□□□□ 0.2
DEFA4P12838 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 KRT19P1-201ENST00000405746 1186 ntBASIC16.29■□□□□ 0.2
DEFA4P12838 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.29■□□□□ 0.2
DEFA4P12838 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DEFA4P12838 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.29■□□□□ 0.2
DEFA4P12838 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DEFA4P12838 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DEFA4P12838 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
DEFA4P12838 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.28■□□□□ 0.2
DEFA4P12838 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 KRT18P20-201ENST00000548986 1279 ntBASIC16.28■□□□□ 0.2
DEFA4P12838 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.28■□□□□ 0.2
DEFA4P12838 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DEFA4P12838 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DEFA4P12838 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.28■□□□□ 0.2
DEFA4P12838 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DEFA4P12838 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.28■□□□□ 0.2
DEFA4P12838 AC004854.2-201ENST00000608450 1441 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms