Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.12■□□□□ 0.97
RARAP10276 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RARAP10276 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.12■□□□□ 0.97
RARAP10276 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.12■□□□□ 0.97
RARAP10276 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RARAP10276 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.11■□□□□ 0.97
RARAP10276 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RARAP10276 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 AC004911.1-201ENST00000416316 871 ntBASIC21.11■□□□□ 0.97
RARAP10276 AC007322.1-201ENST00000426983 750 ntBASIC21.11■□□□□ 0.97
RARAP10276 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.11■□□□□ 0.97
RARAP10276 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RARAP10276 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.11■□□□□ 0.97
RARAP10276 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.11■□□□□ 0.97
RARAP10276 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
RARAP10276 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 AC125437.2-201ENST00000625180 2167 ntBASIC21.1■□□□□ 0.97
RARAP10276 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RARAP10276 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.1■□□□□ 0.97
RARAP10276 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.1■□□□□ 0.97
RARAP10276 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 CYP2T1P-201ENST00000432607 1285 ntBASIC21.1■□□□□ 0.97
RARAP10276 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.1■□□□□ 0.97
RARAP10276 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.1■□□□□ 0.97
RARAP10276 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.1■□□□□ 0.97
RARAP10276 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RARAP10276 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.1■□□□□ 0.97
RARAP10276 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RARAP10276 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
RARAP10276 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.09■□□□□ 0.97
RARAP10276 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 PGM5P4-201ENST00000421970 445 ntBASIC21.09■□□□□ 0.97
RARAP10276 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.09■□□□□ 0.97
RARAP10276 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RARAP10276 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.09■□□□□ 0.97
RARAP10276 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RARAP10276 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RARAP10276 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.08■□□□□ 0.97
RARAP10276 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RARAP10276 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.08■□□□□ 0.97
RARAP10276 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RARAP10276 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.08■□□□□ 0.97
RARAP10276 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RARAP10276 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RARAP10276 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
RARAP10276 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.08■□□□□ 0.97
RARAP10276 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RARAP10276 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.08■□□□□ 0.97
RARAP10276 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RARAP10276 AC100791.3-201ENST00000617619 330 ntBASIC21.08■□□□□ 0.97
RARAP10276 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RARAP10276 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RARAP10276 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.96
RARAP10276 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RARAP10276 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RARAP10276 DPP3P2-201ENST00000416030 1696 ntBASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms