Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TPM3P06753 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.5■■□□□ 1.19
TPM3P06753 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.5■■□□□ 1.19
TPM3P06753 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TPM3P06753 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.5■■□□□ 1.19
TPM3P06753 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.5■■□□□ 1.19
TPM3P06753 AC027682.1-201ENST00000562846 899 ntBASIC22.5■■□□□ 1.19
TPM3P06753 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.5■■□□□ 1.19
TPM3P06753 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.5■■□□□ 1.19
TPM3P06753 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TPM3P06753 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TPM3P06753 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.5■■□□□ 1.19
TPM3P06753 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.5■■□□□ 1.19
TPM3P06753 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.49■■□□□ 1.19
TPM3P06753 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.49■■□□□ 1.19
TPM3P06753 AC099791.1-201ENST00000416440 715 ntBASIC22.49■■□□□ 1.19
TPM3P06753 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
TPM3P06753 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC22.49■■□□□ 1.19
TPM3P06753 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.49■■□□□ 1.19
TPM3P06753 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.49■■□□□ 1.19
TPM3P06753 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TPM3P06753 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
TPM3P06753 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.48■■□□□ 1.19
TPM3P06753 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.48■■□□□ 1.19
TPM3P06753 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.48■■□□□ 1.19
TPM3P06753 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TPM3P06753 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.48■■□□□ 1.19
TPM3P06753 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.48■■□□□ 1.19
TPM3P06753 LETM1P2-201ENST00000597330 2178 ntBASIC22.48■■□□□ 1.19
TPM3P06753 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.47■■□□□ 1.19
TPM3P06753 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
TPM3P06753 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.47■■□□□ 1.19
TPM3P06753 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.47■■□□□ 1.19
TPM3P06753 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 MIR572-201ENST00000384983 95 ntBASIC22.47■■□□□ 1.19
TPM3P06753 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
TPM3P06753 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.47■■□□□ 1.19
TPM3P06753 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TPM3P06753 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.47■■□□□ 1.19
TPM3P06753 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.47■■□□□ 1.19
TPM3P06753 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.47■■□□□ 1.19
TPM3P06753 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.47■■□□□ 1.19
TPM3P06753 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TPM3P06753 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.46■■□□□ 1.19
TPM3P06753 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.46■■□□□ 1.19
TPM3P06753 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
TPM3P06753 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.46■■□□□ 1.19
TPM3P06753 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 AC245052.3-201ENST00000450182 901 ntBASIC22.46■■□□□ 1.19
TPM3P06753 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.46■■□□□ 1.19
TPM3P06753 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.46■■□□□ 1.19
TPM3P06753 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TPM3P06753 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.46■■□□□ 1.19
TPM3P06753 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms