Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.8■□□□□ 0.6
PDGFAP04085 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.8■□□□□ 0.6
PDGFAP04085 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.8■□□□□ 0.6
PDGFAP04085 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PDGFAP04085 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.8■□□□□ 0.6
PDGFAP04085 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PDGFAP04085 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDGFAP04085 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDGFAP04085 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PDGFAP04085 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.79■□□□□ 0.6
PDGFAP04085 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFAP04085 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 AC120498.8-201ENST00000614275 531 ntBASIC18.79■□□□□ 0.6
PDGFAP04085 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFAP04085 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFAP04085 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.79■□□□□ 0.6
PDGFAP04085 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.79■□□□□ 0.6
PDGFAP04085 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDGFAP04085 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 KRT17P2-201ENST00000300992 1314 ntBASIC18.78■□□□□ 0.6
PDGFAP04085 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.78■□□□□ 0.6
PDGFAP04085 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.78■□□□□ 0.6
PDGFAP04085 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.78■□□□□ 0.6
PDGFAP04085 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.78■□□□□ 0.6
PDGFAP04085 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 AC113410.3-201ENST00000623366 203 ntBASIC18.78■□□□□ 0.6
PDGFAP04085 AC133561.5-201ENST00000635547 218 ntBASIC18.78■□□□□ 0.6
PDGFAP04085 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDGFAP04085 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDGFAP04085 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDGFAP04085 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDGFAP04085 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDGFAP04085 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDGFAP04085 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFAP04085 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFAP04085 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFAP04085 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
PDGFAP04085 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 KRASP1-201ENST00000407852 552 ntBASIC18.77■□□□□ 0.6
PDGFAP04085 AC087499.1-201ENST00000418141 1075 ntBASIC18.77■□□□□ 0.6
PDGFAP04085 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.77■□□□□ 0.6
PDGFAP04085 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.77■□□□□ 0.6
PDGFAP04085 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.77■□□□□ 0.6
PDGFAP04085 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDGFAP04085 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PDGFAP04085 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PDGFAP04085 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDGFAP04085 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFAP04085 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.76■□□□□ 0.59
PDGFAP04085 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDGFAP04085 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms