Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN1O95832 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN1O95832 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN1O95832 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLDN1O95832 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN1O95832 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN1O95832 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CLDN1O95832 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN1O95832 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.97■□□□□ 0.47
CLDN1O95832 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLDN1O95832 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 AC087633.2-202ENST00000565166 1439 ntBASIC17.97■□□□□ 0.47
CLDN1O95832 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLDN1O95832 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLDN1O95832 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN1O95832 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN1O95832 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN1O95832 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN1O95832 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN1O95832 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.96■□□□□ 0.47
CLDN1O95832 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN1O95832 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN1O95832 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CLDN1O95832 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN1O95832 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN1O95832 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN1O95832 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN1O95832 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN1O95832 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN1O95832 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN1O95832 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN1O95832 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.96■□□□□ 0.46
CLDN1O95832 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN1O95832 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN1O95832 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 TERF1P1-201ENST00000311003 1181 ntBASIC17.95■□□□□ 0.46
CLDN1O95832 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 RBM17P1-201ENST00000453646 1190 ntBASIC17.95■□□□□ 0.46
CLDN1O95832 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN1O95832 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 AC087388.1-201ENST00000571370 1112 ntBASIC17.95■□□□□ 0.46
CLDN1O95832 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN1O95832 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CLDN1O95832 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CLDN1O95832 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN1O95832 AC079598.2-202ENST00000546624 1451 ntBASIC17.95■□□□□ 0.46
CLDN1O95832 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 LINC01568-207ENST00000641790 1380 ntBASIC17.94■□□□□ 0.46
CLDN1O95832 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN1O95832 FAM197Y1-201ENST00000421178 764 ntBASIC17.94■□□□□ 0.46
CLDN1O95832 DUX4L26-201ENST00000489078 1255 ntBASIC17.94■□□□□ 0.46
CLDN1O95832 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN1O95832 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN1O95832 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN1O95832 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN1O95832 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLDN1O95832 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN1O95832 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN1O95832 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms