Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
GGPS1O95749 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
GGPS1O95749 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.66■■□□□ 1.22
GGPS1O95749 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.66■■□□□ 1.22
GGPS1O95749 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.66■■□□□ 1.22
GGPS1O95749 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.66■■□□□ 1.22
GGPS1O95749 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
GGPS1O95749 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
GGPS1O95749 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.65■■□□□ 1.22
GGPS1O95749 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.65■■□□□ 1.22
GGPS1O95749 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.65■■□□□ 1.22
GGPS1O95749 MIR4497-201ENST00000583208 89 ntBASIC22.65■■□□□ 1.22
GGPS1O95749 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
GGPS1O95749 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.65■■□□□ 1.22
GGPS1O95749 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.65■■□□□ 1.22
GGPS1O95749 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
GGPS1O95749 AL121603.2-201ENST00000557373 2117 ntBASIC22.64■■□□□ 1.22
GGPS1O95749 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
GGPS1O95749 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.64■■□□□ 1.22
GGPS1O95749 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
GGPS1O95749 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.64■■□□□ 1.22
GGPS1O95749 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
GGPS1O95749 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
GGPS1O95749 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
GGPS1O95749 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.64■■□□□ 1.21
GGPS1O95749 AC110285.5-201ENST00000611501 352 ntBASIC22.64■■□□□ 1.21
GGPS1O95749 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
GGPS1O95749 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
GGPS1O95749 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
GGPS1O95749 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
GGPS1O95749 AC124283.5-201ENST00000624661 1809 ntBASIC22.64■■□□□ 1.21
GGPS1O95749 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
GGPS1O95749 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
GGPS1O95749 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.63■■□□□ 1.21
GGPS1O95749 SNORA78-201ENST00000459373 127 ntBASIC22.63■■□□□ 1.21
GGPS1O95749 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
GGPS1O95749 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
GGPS1O95749 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
GGPS1O95749 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
GGPS1O95749 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
GGPS1O95749 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.62■■□□□ 1.21
GGPS1O95749 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.62■■□□□ 1.21
GGPS1O95749 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
GGPS1O95749 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GGPS1O95749 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.62■■□□□ 1.21
GGPS1O95749 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.62■■□□□ 1.21
GGPS1O95749 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 PKD1P6-201ENST00000343738 4769 ntBASIC22.61■■□□□ 1.21
GGPS1O95749 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
GGPS1O95749 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.61■■□□□ 1.21
GGPS1O95749 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.61■■□□□ 1.21
GGPS1O95749 PRKY-204ENST00000533551 1019 ntBASIC22.61■■□□□ 1.21
GGPS1O95749 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
GGPS1O95749 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.61■■□□□ 1.21
GGPS1O95749 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.61■■□□□ 1.21
GGPS1O95749 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
GGPS1O95749 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.61■■□□□ 1.21
GGPS1O95749 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
GGPS1O95749 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.6■■□□□ 1.21
GGPS1O95749 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
GGPS1O95749 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
GGPS1O95749 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.6■■□□□ 1.21
GGPS1O95749 AC012618.2-201ENST00000428058 849 ntBASIC22.6■■□□□ 1.21
GGPS1O95749 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.6■■□□□ 1.21
GGPS1O95749 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.6■■□□□ 1.21
GGPS1O95749 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms