Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX4O95219 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX4O95219 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.83■□□□□ 0.6
SNX4O95219 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.83■□□□□ 0.6
SNX4O95219 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX4O95219 MIR4758-201ENST00000577688 71 ntBASIC18.83■□□□□ 0.6
SNX4O95219 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SNX4O95219 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX4O95219 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.83■□□□□ 0.6
SNX4O95219 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX4O95219 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX4O95219 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX4O95219 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX4O95219 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX4O95219 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX4O95219 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX4O95219 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.82■□□□□ 0.6
SNX4O95219 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 MIPEPP3-201ENST00000412105 444 ntBASIC18.82■□□□□ 0.6
SNX4O95219 AC073210.2-201ENST00000430369 194 ntBASIC18.82■□□□□ 0.6
SNX4O95219 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX4O95219 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX4O95219 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX4O95219 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX4O95219 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX4O95219 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX4O95219 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX4O95219 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SNX4O95219 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SNX4O95219 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.81■□□□□ 0.6
SNX4O95219 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX4O95219 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.81■□□□□ 0.6
SNX4O95219 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX4O95219 AC133041.1-202ENST00000642053 222 ntBASIC18.81■□□□□ 0.6
SNX4O95219 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX4O95219 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX4O95219 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX4O95219 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SNX4O95219 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX4O95219 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX4O95219 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX4O95219 MCRIP2P1-201ENST00000394346 511 ntBASIC18.8■□□□□ 0.6
SNX4O95219 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX4O95219 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SNX4O95219 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX4O95219 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms