Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BEST1O76090 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BEST1O76090 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.18■□□□□ 0.98
BEST1O76090 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.18■□□□□ 0.98
BEST1O76090 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.18■□□□□ 0.98
BEST1O76090 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.18■□□□□ 0.98
BEST1O76090 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.18■□□□□ 0.98
BEST1O76090 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 AC073648.6-201ENST00000641589 218 ntBASIC21.18■□□□□ 0.98
BEST1O76090 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
BEST1O76090 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BEST1O76090 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.17■□□□□ 0.98
BEST1O76090 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BEST1O76090 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.17■□□□□ 0.98
BEST1O76090 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 KRT18P29-201ENST00000397031 1267 ntBASIC21.17■□□□□ 0.98
BEST1O76090 AL390719.1-204ENST00000412397 1219 ntBASIC21.17■□□□□ 0.98
BEST1O76090 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
BEST1O76090 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.17■□□□□ 0.98
BEST1O76090 AC120498.8-201ENST00000614275 531 ntBASIC21.17■□□□□ 0.98
BEST1O76090 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.17■□□□□ 0.98
BEST1O76090 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BEST1O76090 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BEST1O76090 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.16■□□□□ 0.98
BEST1O76090 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.16■□□□□ 0.98
BEST1O76090 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
BEST1O76090 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.16■□□□□ 0.98
BEST1O76090 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.16■□□□□ 0.98
BEST1O76090 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.16■□□□□ 0.98
BEST1O76090 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.16■□□□□ 0.98
BEST1O76090 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BEST1O76090 AC124283.5-201ENST00000624661 1809 ntBASIC21.15■□□□□ 0.98
BEST1O76090 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.15■□□□□ 0.98
BEST1O76090 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BEST1O76090 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
BEST1O76090 KRT8P17-201ENST00000453110 1448 ntBASIC21.15■□□□□ 0.98
BEST1O76090 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST1O76090 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST1O76090 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST1O76090 POM121L13P-201ENST00000422362 380 ntBASIC21.15■□□□□ 0.98
BEST1O76090 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.15■□□□□ 0.98
BEST1O76090 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
BEST1O76090 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BEST1O76090 AL512408.1-201ENST00000569378 2000 ntBASIC21.15■□□□□ 0.98
BEST1O76090 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
BEST1O76090 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
BEST1O76090 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.15■□□□□ 0.98
BEST1O76090 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BEST1O76090 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
BEST1O76090 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
BEST1O76090 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
BEST1O76090 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST1O76090 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
BEST1O76090 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST1O76090 AC098590.1-201ENST00000468126 897 ntBASIC21.14■□□□□ 0.97
BEST1O76090 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.14■□□□□ 0.97
BEST1O76090 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.14■□□□□ 0.97
BEST1O76090 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.14■□□□□ 0.97
BEST1O76090 AL031963.3-201ENST00000606441 850 ntBASIC21.14■□□□□ 0.97
BEST1O76090 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.14■□□□□ 0.97
BEST1O76090 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST1O76090 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST1O76090 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
BEST1O76090 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BEST1O76090 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
BEST1O76090 LINC01006-201ENST00000333319 2292 ntBASIC21.13■□□□□ 0.97
BEST1O76090 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms