Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CEACAM4O75871 KSR1P1-201ENST00000446298 240 ntBASIC18.38■□□□□ 0.53
CEACAM4O75871 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.38■□□□□ 0.53
CEACAM4O75871 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.38■□□□□ 0.53
CEACAM4O75871 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.38■□□□□ 0.53
CEACAM4O75871 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEACAM4O75871 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CEACAM4O75871 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CEACAM4O75871 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CEACAM4O75871 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEACAM4O75871 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CEACAM4O75871 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.38■□□□□ 0.53
CEACAM4O75871 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.38■□□□□ 0.53
CEACAM4O75871 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.38■□□□□ 0.53
CEACAM4O75871 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
CEACAM4O75871 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.37■□□□□ 0.53
CEACAM4O75871 Z98882.1-201ENST00000622160 2253 ntBASIC18.37■□□□□ 0.53
CEACAM4O75871 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CEACAM4O75871 NIFKP9-201ENST00000419265 221 ntBASIC18.37■□□□□ 0.53
CEACAM4O75871 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.37■□□□□ 0.53
CEACAM4O75871 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.37■□□□□ 0.53
CEACAM4O75871 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 AL445228.2-201ENST00000605589 952 ntBASIC18.37■□□□□ 0.53
CEACAM4O75871 AL031963.3-201ENST00000606441 850 ntBASIC18.37■□□□□ 0.53
CEACAM4O75871 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.37■□□□□ 0.53
CEACAM4O75871 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 KRT8P9-201ENST00000558927 1449 ntBASIC18.37■□□□□ 0.53
CEACAM4O75871 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CEACAM4O75871 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CEACAM4O75871 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 AC121338.2-201ENST00000622535 1744 ntBASIC18.37■□□□□ 0.53
CEACAM4O75871 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CEACAM4O75871 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CEACAM4O75871 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CEACAM4O75871 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
CEACAM4O75871 KRT8P20-201ENST00000423953 1409 ntBASIC18.36■□□□□ 0.53
CEACAM4O75871 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.36■□□□□ 0.53
CEACAM4O75871 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.36■□□□□ 0.53
CEACAM4O75871 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.36■□□□□ 0.53
CEACAM4O75871 AL049796.1-201ENST00000565336 1766 ntBASIC18.36■□□□□ 0.53
CEACAM4O75871 AP000525.1-201ENST00000608286 694 ntBASIC18.36■□□□□ 0.53
CEACAM4O75871 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CEACAM4O75871 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 AC005363.2-201ENST00000618631 242 ntBASIC18.36■□□□□ 0.53
CEACAM4O75871 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CEACAM4O75871 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CEACAM4O75871 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.35■□□□□ 0.53
CEACAM4O75871 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CEACAM4O75871 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.35■□□□□ 0.53
CEACAM4O75871 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CEACAM4O75871 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.35■□□□□ 0.53
CEACAM4O75871 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.35■□□□□ 0.53
CEACAM4O75871 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CEACAM4O75871 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.35■□□□□ 0.53
CEACAM4O75871 FITM1-202ENST00000559294 800 ntBASIC18.35■□□□□ 0.53
CEACAM4O75871 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.35■□□□□ 0.53
CEACAM4O75871 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.35■□□□□ 0.53
CEACAM4O75871 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CEACAM4O75871 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.34■□□□□ 0.53
CEACAM4O75871 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CEACAM4O75871 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.34■□□□□ 0.53
CEACAM4O75871 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CEACAM4O75871 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms