Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PDCD6O75340 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
PDCD6O75340 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.98■□□□□ 0.31
PDCD6O75340 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.98■□□□□ 0.31
PDCD6O75340 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.98■□□□□ 0.31
PDCD6O75340 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
PDCD6O75340 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.98■□□□□ 0.31
PDCD6O75340 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.98■□□□□ 0.31
PDCD6O75340 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.98■□□□□ 0.31
PDCD6O75340 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
PDCD6O75340 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDCD6O75340 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.98■□□□□ 0.31
PDCD6O75340 AC125437.2-201ENST00000625180 2167 ntBASIC16.98■□□□□ 0.31
PDCD6O75340 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDCD6O75340 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 AL691432.2-201ENST00000607222 2038 ntBASIC16.97■□□□□ 0.31
PDCD6O75340 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.97■□□□□ 0.31
PDCD6O75340 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.97■□□□□ 0.31
PDCD6O75340 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.97■□□□□ 0.31
PDCD6O75340 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PDCD6O75340 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 AL356652.1-201ENST00000615962 565 ntBASIC16.97■□□□□ 0.31
PDCD6O75340 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.97■□□□□ 0.31
PDCD6O75340 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.97■□□□□ 0.31
PDCD6O75340 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDCD6O75340 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.96■□□□□ 0.31
PDCD6O75340 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.96■□□□□ 0.31
PDCD6O75340 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.96■□□□□ 0.31
PDCD6O75340 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.96■□□□□ 0.31
PDCD6O75340 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.96■□□□□ 0.31
PDCD6O75340 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDCD6O75340 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDCD6O75340 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
PDCD6O75340 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDCD6O75340 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.96■□□□□ 0.3
PDCD6O75340 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
PDCD6O75340 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PDCD6O75340 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDCD6O75340 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDCD6O75340 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
PDCD6O75340 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.95■□□□□ 0.3
PDCD6O75340 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDCD6O75340 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDCD6O75340 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDCD6O75340 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDCD6O75340 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms