Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHL41O60662 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.91■□□□□ 0.78
KLHL41O60662 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KLHL41O60662 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.91■□□□□ 0.78
KLHL41O60662 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KLHL41O60662 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
KLHL41O60662 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KLHL41O60662 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KLHL41O60662 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.9■□□□□ 0.78
KLHL41O60662 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.9■□□□□ 0.78
KLHL41O60662 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.9■□□□□ 0.78
KLHL41O60662 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.9■□□□□ 0.78
KLHL41O60662 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
KLHL41O60662 AC116562.4-201ENST00000641316 2276 ntBASIC19.9■□□□□ 0.78
KLHL41O60662 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KLHL41O60662 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
KLHL41O60662 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KLHL41O60662 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
KLHL41O60662 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KLHL41O60662 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 CROCCP5-201ENST00000436658 830 ntBASIC19.89■□□□□ 0.77
KLHL41O60662 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.89■□□□□ 0.77
KLHL41O60662 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KLHL41O60662 KRT18P20-201ENST00000548986 1279 ntBASIC19.89■□□□□ 0.77
KLHL41O60662 AC061975.6-201ENST00000579045 1553 ntBASIC19.89■□□□□ 0.77
KLHL41O60662 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 AC104187.1-201ENST00000607510 612 ntBASIC19.89■□□□□ 0.77
KLHL41O60662 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KLHL41O60662 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
KLHL41O60662 AL020996.1-203ENST00000536896 2307 ntBASIC19.88■□□□□ 0.77
KLHL41O60662 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KLHL41O60662 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KLHL41O60662 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHL41O60662 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KLHL41O60662 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 AC007322.1-201ENST00000426983 750 ntBASIC19.88■□□□□ 0.77
KLHL41O60662 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.88■□□□□ 0.77
KLHL41O60662 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
KLHL41O60662 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KLHL41O60662 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.87■□□□□ 0.77
KLHL41O60662 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KLHL41O60662 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.87■□□□□ 0.77
KLHL41O60662 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 MIR663A-201ENST00000385250 93 ntBASIC19.87■□□□□ 0.77
KLHL41O60662 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.87■□□□□ 0.77
KLHL41O60662 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.87■□□□□ 0.77
KLHL41O60662 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.87■□□□□ 0.77
KLHL41O60662 AL121832.2-201ENST00000610979 668 ntBASIC19.87■□□□□ 0.77
KLHL41O60662 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
KLHL41O60662 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KLHL41O60662 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.86■□□□□ 0.77
KLHL41O60662 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms