Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDHGA12O60330 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHGA12O60330 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGA12O60330 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGA12O60330 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHGA12O60330 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGA12O60330 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 AL390719.1-204ENST00000412397 1219 ntBASIC19.94■□□□□ 0.78
PCDHGA12O60330 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 RARRES2P10-201ENST00000564312 460 ntBASIC19.94■□□□□ 0.78
PCDHGA12O60330 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 AC010331.1-201ENST00000611423 582 ntBASIC19.94■□□□□ 0.78
PCDHGA12O60330 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGA12O60330 AC244015.2-201ENST00000616358 1861 ntBASIC19.94■□□□□ 0.78
PCDHGA12O60330 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGA12O60330 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 KRASP1-201ENST00000407852 552 ntBASIC19.93■□□□□ 0.78
PCDHGA12O60330 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 AC006557.6-201ENST00000623071 864 ntBASIC19.93■□□□□ 0.78
PCDHGA12O60330 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.93■□□□□ 0.78
PCDHGA12O60330 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGA12O60330 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA12O60330 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms