Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX4O60224 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SSX4O60224 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX4O60224 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSX4O60224 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.17■□□□□ 0.5
SSX4O60224 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX4O60224 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSX4O60224 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.17■□□□□ 0.5
SSX4O60224 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX4O60224 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.17■□□□□ 0.5
SSX4O60224 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.17■□□□□ 0.5
SSX4O60224 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSX4O60224 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SSX4O60224 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SSX4O60224 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
SSX4O60224 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSX4O60224 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSX4O60224 AL512408.1-201ENST00000569378 2000 ntBASIC18.16■□□□□ 0.5
SSX4O60224 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX4O60224 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSX4O60224 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSX4O60224 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX4O60224 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX4O60224 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.16■□□□□ 0.5
SSX4O60224 AC020907.5-201ENST00000624372 1936 ntBASIC18.16■□□□□ 0.5
SSX4O60224 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SSX4O60224 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX4O60224 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX4O60224 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX4O60224 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.16■□□□□ 0.5
SSX4O60224 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.16■□□□□ 0.5
SSX4O60224 UBE2DNL-204ENST00000602536 740 ntBASIC18.16■□□□□ 0.5
SSX4O60224 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX4O60224 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSX4O60224 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.16■□□□□ 0.5
SSX4O60224 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSX4O60224 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.16■□□□□ 0.5
SSX4O60224 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX4O60224 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SSX4O60224 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SSX4O60224 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SSX4O60224 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX4O60224 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX4O60224 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SSX4O60224 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SSX4O60224 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SSX4O60224 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.15■□□□□ 0.5
SSX4O60224 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.15■□□□□ 0.5
SSX4O60224 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.15■□□□□ 0.5
SSX4O60224 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.15■□□□□ 0.5
SSX4O60224 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.15■□□□□ 0.5
SSX4O60224 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 AC099778.1-201ENST00000568593 1911 ntBASIC18.15■□□□□ 0.5
SSX4O60224 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSX4O60224 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
SSX4O60224 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.14■□□□□ 0.5
SSX4O60224 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX4O60224 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.14■□□□□ 0.5
SSX4O60224 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX4O60224 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSX4O60224 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX4O60224 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.14■□□□□ 0.49
SSX4O60224 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SSX4O60224 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSX4O60224 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX4O60224 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SSX4O60224 AC007322.1-201ENST00000426983 750 ntBASIC18.14■□□□□ 0.49
SSX4O60224 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX4O60224 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.14■□□□□ 0.49
SSX4O60224 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.14■□□□□ 0.49
SSX4O60224 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SSX4O60224 AP001160.3-201ENST00000601484 763 ntBASIC18.14■□□□□ 0.49
SSX4O60224 AC231657.2-201ENST00000624556 255 ntBASIC18.14■□□□□ 0.49
SSX4O60224 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SSX4O60224 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX4O60224 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSX4O60224 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms