Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.22■□□□□ 0.51
SMAD9O15198 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 AC098934.4-201ENST00000564127 592 ntBASIC18.22■□□□□ 0.51
SMAD9O15198 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.22■□□□□ 0.51
SMAD9O15198 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 AC092118.2-201ENST00000613495 667 ntBASIC18.22■□□□□ 0.51
SMAD9O15198 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMAD9O15198 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SMAD9O15198 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SMAD9O15198 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SMAD9O15198 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMAD9O15198 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.22■□□□□ 0.51
SMAD9O15198 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMAD9O15198 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.21■□□□□ 0.51
SMAD9O15198 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 AC007225.1-201ENST00000566331 1836 ntBASIC18.21■□□□□ 0.51
SMAD9O15198 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SMAD9O15198 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMAD9O15198 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.21■□□□□ 0.51
SMAD9O15198 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMAD9O15198 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.21■□□□□ 0.51
SMAD9O15198 MIR4758-201ENST00000577688 71 ntBASIC18.21■□□□□ 0.51
SMAD9O15198 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.21■□□□□ 0.51
SMAD9O15198 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMAD9O15198 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMAD9O15198 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMAD9O15198 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMAD9O15198 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMAD9O15198 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.2■□□□□ 0.5
SMAD9O15198 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.2■□□□□ 0.5
SMAD9O15198 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMAD9O15198 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SMAD9O15198 AL391422.3-201ENST00000603791 2761 ntBASIC18.2■□□□□ 0.5
SMAD9O15198 KRT8P36-201ENST00000489121 1440 ntBASIC18.2■□□□□ 0.5
SMAD9O15198 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SMAD9O15198 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMAD9O15198 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SMAD9O15198 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD9O15198 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SMAD9O15198 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMAD9O15198 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMAD9O15198 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.19■□□□□ 0.5
SMAD9O15198 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.19■□□□□ 0.5
SMAD9O15198 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.19■□□□□ 0.5
SMAD9O15198 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.19■□□□□ 0.5
SMAD9O15198 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
SMAD9O15198 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SMAD9O15198 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
SMAD9O15198 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD9O15198 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD9O15198 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD9O15198 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.18■□□□□ 0.5
SMAD9O15198 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.18■□□□□ 0.5
SMAD9O15198 AC069152.1-201ENST00000438030 544 ntBASIC18.18■□□□□ 0.5
SMAD9O15198 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD9O15198 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SMAD9O15198 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms