Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.77■□□□□ 0.6
AP3D1O14617 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
AP3D1O14617 MIR5787-201ENST00000611784 55 ntBASIC18.77■□□□□ 0.6
AP3D1O14617 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3D1O14617 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3D1O14617 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3D1O14617 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
AP3D1O14617 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3D1O14617 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3D1O14617 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.77■□□□□ 0.6
AP3D1O14617 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3D1O14617 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3D1O14617 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AP3D1O14617 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
AP3D1O14617 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
AP3D1O14617 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
AP3D1O14617 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AP3D1O14617 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.76■□□□□ 0.59
AP3D1O14617 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.76■□□□□ 0.59
AP3D1O14617 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
AP3D1O14617 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AP3D1O14617 AC010536.3-201ENST00000620306 533 ntBASIC18.76■□□□□ 0.59
AP3D1O14617 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
AP3D1O14617 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.76■□□□□ 0.59
AP3D1O14617 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3D1O14617 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
AP3D1O14617 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
AP3D1O14617 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3D1O14617 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3D1O14617 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
AP3D1O14617 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3D1O14617 AFG3L1P-217ENST00000557444 2447 ntBASIC18.75■□□□□ 0.59
AP3D1O14617 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
AP3D1O14617 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.75■□□□□ 0.59
AP3D1O14617 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
AP3D1O14617 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3D1O14617 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3D1O14617 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 TERF1P5-201ENST00000477545 1207 ntBASIC18.74■□□□□ 0.59
AP3D1O14617 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3D1O14617 MFSD11-216ENST00000590393 1141 ntBASIC18.74■□□□□ 0.59
AP3D1O14617 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3D1O14617 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3D1O14617 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3D1O14617 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3D1O14617 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AP3D1O14617 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AP3D1O14617 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3D1O14617 AC099778.1-201ENST00000568593 1911 ntBASIC18.73■□□□□ 0.59
AP3D1O14617 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AP3D1O14617 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.73■□□□□ 0.59
AP3D1O14617 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.73■□□□□ 0.59
AP3D1O14617 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3D1O14617 AC016769.1-201ENST00000409132 1010 ntBASIC18.73■□□□□ 0.59
AP3D1O14617 AC007322.3-201ENST00000426526 701 ntBASIC18.73■□□□□ 0.59
AP3D1O14617 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.73■□□□□ 0.59
AP3D1O14617 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3D1O14617 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3D1O14617 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3D1O14617 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
AP3D1O14617 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3D1O14617 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms