Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAFD1O14545 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAFD1O14545 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAFD1O14545 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAFD1O14545 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 AC006128.1-201ENST00000624704 1661 ntBASIC20.61■□□□□ 0.89
TRAFD1O14545 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAFD1O14545 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRAFD1O14545 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAFD1O14545 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAFD1O14545 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAFD1O14545 AC098934.4-201ENST00000564127 592 ntBASIC20.61■□□□□ 0.89
TRAFD1O14545 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRAFD1O14545 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRAFD1O14545 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAFD1O14545 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRAFD1O14545 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAFD1O14545 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRAFD1O14545 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TRAFD1O14545 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAFD1O14545 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAFD1O14545 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRAFD1O14545 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAFD1O14545 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.6■□□□□ 0.89
TRAFD1O14545 MIR4758-201ENST00000577688 71 ntBASIC20.6■□□□□ 0.89
TRAFD1O14545 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TRAFD1O14545 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAFD1O14545 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAFD1O14545 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAFD1O14545 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
TRAFD1O14545 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAFD1O14545 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.59■□□□□ 0.89
TRAFD1O14545 AC069152.1-201ENST00000438030 544 ntBASIC20.59■□□□□ 0.89
TRAFD1O14545 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRAFD1O14545 MIR2861-201ENST00000636310 90 ntBASIC20.59■□□□□ 0.89
TRAFD1O14545 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAFD1O14545 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAFD1O14545 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRAFD1O14545 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAFD1O14545 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAFD1O14545 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRAFD1O14545 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAFD1O14545 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAFD1O14545 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.58■□□□□ 0.89
TRAFD1O14545 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
TRAFD1O14545 AL589743.5-201ENST00000616611 1050 ntBASIC20.58■□□□□ 0.89
TRAFD1O14545 AC105020.6-201ENST00000621523 1217 ntBASIC20.58■□□□□ 0.89
TRAFD1O14545 AC133041.1-202ENST00000642053 222 ntBASIC20.58■□□□□ 0.89
TRAFD1O14545 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
TRAFD1O14545 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAFD1O14545 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAFD1O14545 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAFD1O14545 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TRAFD1O14545 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAFD1O14545 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.58■□□□□ 0.88
TRAFD1O14545 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAFD1O14545 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAFD1O14545 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms