Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTCAO00442 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
RTCAO00442 GPX1P1-201ENST00000388829 606 ntBASIC19.21■□□□□ 0.67
RTCAO00442 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.21■□□□□ 0.67
RTCAO00442 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.21■□□□□ 0.67
RTCAO00442 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RTCAO00442 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.21■□□□□ 0.67
RTCAO00442 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.21■□□□□ 0.67
RTCAO00442 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTCAO00442 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTCAO00442 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RTCAO00442 MIPEPP3-201ENST00000412105 444 ntBASIC19.2■□□□□ 0.66
RTCAO00442 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.2■□□□□ 0.66
RTCAO00442 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTCAO00442 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RTCAO00442 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTCAO00442 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.19■□□□□ 0.66
RTCAO00442 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTCAO00442 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTCAO00442 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.19■□□□□ 0.66
RTCAO00442 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTCAO00442 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.19■□□□□ 0.66
RTCAO00442 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.19■□□□□ 0.66
RTCAO00442 TSPY6P-201ENST00000448518 926 ntBASIC19.19■□□□□ 0.66
RTCAO00442 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.19■□□□□ 0.66
RTCAO00442 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.19■□□□□ 0.66
RTCAO00442 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTCAO00442 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTCAO00442 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.19■□□□□ 0.66
RTCAO00442 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RTCAO00442 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTCAO00442 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RTCAO00442 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTCAO00442 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RTCAO00442 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTCAO00442 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTCAO00442 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.18■□□□□ 0.66
RTCAO00442 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
RTCAO00442 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RTCAO00442 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.18■□□□□ 0.66
RTCAO00442 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTCAO00442 SLC25A24-204ENST00000569674 2357 ntBASIC19.18■□□□□ 0.66
RTCAO00442 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTCAO00442 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTCAO00442 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.18■□□□□ 0.66
RTCAO00442 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTCAO00442 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTCAO00442 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTCAO00442 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.18■□□□□ 0.66
RTCAO00442 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.18■□□□□ 0.66
RTCAO00442 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.18■□□□□ 0.66
RTCAO00442 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
RTCAO00442 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.17■□□□□ 0.66
RTCAO00442 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RTCAO00442 SLC29A4P1-201ENST00000398760 971 ntBASIC19.17■□□□□ 0.66
RTCAO00442 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.17■□□□□ 0.66
RTCAO00442 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.17■□□□□ 0.66
RTCAO00442 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.17■□□□□ 0.66
RTCAO00442 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.17■□□□□ 0.66
RTCAO00442 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.17■□□□□ 0.66
RTCAO00442 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.17■□□□□ 0.66
RTCAO00442 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RTCAO00442 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
RTCAO00442 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTCAO00442 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms