Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.69■□□□□ 0.9
DFFAO00273 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
DFFAO00273 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.69■□□□□ 0.9
DFFAO00273 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DFFAO00273 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DFFAO00273 AC098934.4-201ENST00000564127 592 ntBASIC20.69■□□□□ 0.9
DFFAO00273 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.69■□□□□ 0.9
DFFAO00273 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.69■□□□□ 0.9
DFFAO00273 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.69■□□□□ 0.9
DFFAO00273 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
DFFAO00273 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.69■□□□□ 0.9
DFFAO00273 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
DFFAO00273 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DFFAO00273 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.69■□□□□ 0.9
DFFAO00273 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DFFAO00273 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.68■□□□□ 0.9
DFFAO00273 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
DFFAO00273 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DFFAO00273 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.68■□□□□ 0.9
DFFAO00273 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.68■□□□□ 0.9
DFFAO00273 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.68■□□□□ 0.9
DFFAO00273 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.68■□□□□ 0.9
DFFAO00273 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
DFFAO00273 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.68■□□□□ 0.9
DFFAO00273 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
DFFAO00273 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.68■□□□□ 0.9
DFFAO00273 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.68■□□□□ 0.9
DFFAO00273 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.68■□□□□ 0.9
DFFAO00273 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DFFAO00273 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.67■□□□□ 0.9
DFFAO00273 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.67■□□□□ 0.9
DFFAO00273 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 AL391422.3-201ENST00000603791 2761 ntBASIC20.67■□□□□ 0.9
DFFAO00273 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.67■□□□□ 0.9
DFFAO00273 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.67■□□□□ 0.9
DFFAO00273 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.67■□□□□ 0.9
DFFAO00273 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DFFAO00273 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DFFAO00273 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.67■□□□□ 0.9
DFFAO00273 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DFFAO00273 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DFFAO00273 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.66■□□□□ 0.9
DFFAO00273 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DFFAO00273 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 AC091874.3-201ENST00000512672 1195 ntBASIC20.66■□□□□ 0.9
DFFAO00273 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.66■□□□□ 0.9
DFFAO00273 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.66■□□□□ 0.9
DFFAO00273 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.66■□□□□ 0.9
DFFAO00273 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
DFFAO00273 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.66■□□□□ 0.9
DFFAO00273 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DFFAO00273 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DFFAO00273 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
DFFAO00273 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DFFAO00273 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DFFAO00273 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.65■□□□□ 0.9
DFFAO00273 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.65■□□□□ 0.9
DFFAO00273 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DFFAO00273 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DFFAO00273 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DFFAO00273 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DFFAO00273 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DFFAO00273 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms