Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMX2-CTNND1H3BSU7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC244015.2-201ENST00000616358 1861 ntBASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 FEM1AP4-201ENST00000443167 1987 ntBASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMX2-CTNND1H3BSU7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 POM121L13P-201ENST00000422362 380 ntBASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMX2-CTNND1H3BSU7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TMX2-CTNND1H3BSU7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC069544.1-201ENST00000609399 999 ntBASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMX2-CTNND1H3BSU7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms