Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
PLEKHD1A6NEE1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC31.2■■■□□ 2.59
PLEKHD1A6NEE1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.2■■■□□ 2.58
PLEKHD1A6NEE1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
PLEKHD1A6NEE1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PLEKHD1A6NEE1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
PLEKHD1A6NEE1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC31.2■■■□□ 2.58
PLEKHD1A6NEE1 PTBP1P-201ENST00000554374 1601 ntBASIC31.2■■■□□ 2.58
PLEKHD1A6NEE1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 AC104076.2-201ENST00000448912 469 ntBASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PLEKHD1A6NEE1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 HLA-G-202ENST00000376815 851 ntBASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 HLA-G-203ENST00000376818 1127 ntBASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 DUX4L26-201ENST00000489078 1255 ntBASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PLEKHD1A6NEE1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.17■■■□□ 2.58
PLEKHD1A6NEE1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PLEKHD1A6NEE1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 NTF6B-201ENST00000591913 560 ntBASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PLEKHD1A6NEE1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
PLEKHD1A6NEE1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
PLEKHD1A6NEE1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
PLEKHD1A6NEE1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PLEKHD1A6NEE1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PLEKHD1A6NEE1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PLEKHD1A6NEE1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PLEKHD1A6NEE1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC31.12■■■□□ 2.57
PLEKHD1A6NEE1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC31.12■■■□□ 2.57
PLEKHD1A6NEE1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC31.12■■■□□ 2.57
PLEKHD1A6NEE1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms