Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CNOT1A5YKK6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 AC139887.4-201ENST00000607877 719 ntBASIC19.36■□□□□ 0.69
CNOT1A5YKK6 AC011558.1-201ENST00000623459 338 ntBASIC19.36■□□□□ 0.69
CNOT1A5YKK6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 MESTP1-201ENST00000404287 994 ntBASIC19.36■□□□□ 0.69
CNOT1A5YKK6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.36■□□□□ 0.69
CNOT1A5YKK6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT1A5YKK6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 AC092647.4-201ENST00000457211 535 ntBASIC19.35■□□□□ 0.69
CNOT1A5YKK6 EGLN1P1-201ENST00000531623 762 ntBASIC19.35■□□□□ 0.69
CNOT1A5YKK6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 AC097488.1-201ENST00000507834 756 ntBASIC19.35■□□□□ 0.69
CNOT1A5YKK6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNOT1A5YKK6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 INGX-201ENST00000359239 846 ntBASIC19.34■□□□□ 0.69
CNOT1A5YKK6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 RN7SL510P-201ENST00000581311 263 ntBASIC19.34■□□□□ 0.69
CNOT1A5YKK6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 AL138966.2-201ENST00000621997 464 ntBASIC19.34■□□□□ 0.69
CNOT1A5YKK6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT1A5YKK6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.33■□□□□ 0.69
CNOT1A5YKK6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 PCED1CP-201ENST00000419887 785 ntBASIC19.33■□□□□ 0.68
CNOT1A5YKK6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT1A5YKK6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 TSPY5P-201ENST00000426936 936 ntBASIC19.32■□□□□ 0.68
CNOT1A5YKK6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.32■□□□□ 0.68
CNOT1A5YKK6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms