Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC093503.3-201ENST00000624917 2352 ntBASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 AC007322.3-201ENST00000426526 701 ntBASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 AL355001.2-201ENST00000620617 1191 ntBASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 LINC01465-201ENST00000408887 1940 ntBASIC15.04■□□□□ -0
TRBV6-1A0A0K0K1D8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-1A0A0K0K1D8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 AC091799.1-201ENST00000422823 811 ntBASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-1A0A0K0K1D8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-1A0A0K0K1D8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRBV6-1A0A0K0K1D8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms