Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC133552.2-202ENST00000575694 574 ntBASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC105036.2-201ENST00000569468 176 ntBASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.79■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AF201337.1-201ENST00000520239 748 ntBASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
IGKV1D-43A0A0B4J1Z2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms