Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 AF213884.3-201ENST00000563833 479 ntBASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV25-1A0A075B6N4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 MIR939-201ENST00000401314 82 ntBASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 AL162377.1-201ENST00000618844 1793 ntBASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV25-1A0A075B6N4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 PLK5-205ENST00000642079 1969 ntBASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 AL354811.1-201ENST00000610286 706 ntBASIC14.46□□□□□ -0.09
TRBV25-1A0A075B6N4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TRBV25-1A0A075B6N4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.46□□□□□ -0.1
TRBV25-1A0A075B6N4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV25-1A0A075B6N4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC14.46□□□□□ -0.1
TRBV25-1A0A075B6N4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
TRBV25-1A0A075B6N4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV25-1A0A075B6N4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 AP004607.4-201ENST00000530158 1459 ntBASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 AC099778.1-201ENST00000568593 1911 ntBASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV25-1A0A075B6N4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms