Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AP000459.1-201ENST00000433101 861 ntTSL 3 BASIC8.13□□□□□ -1.11
NID1P14543 SPAG11A-205ENST00000434307 777 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 AL590004.3-202ENST00000445883 451 ntBASIC8.13□□□□□ -1.11
NID1P14543 AC104978.1-201ENST00000449387 391 ntBASIC8.13□□□□□ -1.11
NID1P14543 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 AC027673.1-201ENST00000456245 405 ntBASIC8.13□□□□□ -1.11
NID1P14543 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC8.13□□□□□ -1.11
NID1P14543 RN7SL761P-201ENST00000463259 278 ntBASIC8.13□□□□□ -1.11
NID1P14543 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 AL645949.1-201ENST00000510094 324 ntBASIC8.13□□□□□ -1.11
NID1P14543 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC8.13□□□□□ -1.11
NID1P14543 RPS3-207ENST00000526608 710 ntTSL 5 BASIC8.13□□□□□ -1.11
NID1P14543 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC8.13□□□□□ -1.11
NID1P14543 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC8.13□□□□□ -1.11
NID1P14543 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 CDRT7-201ENST00000568256 767 ntTSL 3 BASIC8.13□□□□□ -1.11
NID1P14543 AC135628.1-201ENST00000568867 534 ntBASIC8.13□□□□□ -1.11
NID1P14543 MIR548S-201ENST00000581352 82 ntBASIC8.13□□□□□ -1.11
NID1P14543 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.13□□□□□ -1.11
NID1P14543 LINC01764-201ENST00000587970 380 ntTSL 4 BASIC8.13□□□□□ -1.11
NID1P14543 AL662797.3-201ENST00000607476 773 ntBASIC8.13□□□□□ -1.11
NID1P14543 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC8.13□□□□□ -1.11
NID1P14543 AL080285.2-201ENST00000612765 458 ntBASIC8.13□□□□□ -1.11
NID1P14543 RN7SL575P-201ENST00000620774 299 ntBASIC8.13□□□□□ -1.11
NID1P14543 AC011483.4-201ENST00000623621 585 ntBASIC8.13□□□□□ -1.11
NID1P14543 LINC00581-201ENST00000630914 990 ntTSL 3 BASIC8.13□□□□□ -1.11
NID1P14543 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 AC128688.2-201ENST00000563632 1937 ntBASIC8.13□□□□□ -1.11
NID1P14543 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 TCP1P3-201ENST00000414406 1498 ntBASIC8.13□□□□□ -1.11
NID1P14543 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC8.13□□□□□ -1.11
NID1P14543 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NID1P14543 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 TFDP2-209ENST00000477292 1403 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 SP2-AS1-201ENST00000411573 1738 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NID1P14543 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 RN7SKP72-201ENST00000362327 292 ntBASIC8.12□□□□□ -1.11
NID1P14543 RNU6-618P-201ENST00000363518 112 ntBASIC8.12□□□□□ -1.11
NID1P14543 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 RNU4-22P-201ENST00000411058 166 ntBASIC8.12□□□□□ -1.11
NID1P14543 MTCO1P17-201ENST00000411522 491 ntBASIC8.12□□□□□ -1.11
NID1P14543 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 EIF4A1P13-201ENST00000415667 230 ntBASIC8.12□□□□□ -1.11
NID1P14543 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 PTP4A1P5-201ENST00000420305 455 ntBASIC8.12□□□□□ -1.11
NID1P14543 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 RPL6P2-201ENST00000425480 783 ntBASIC8.12□□□□□ -1.11
NID1P14543 RPL26P34-201ENST00000431005 451 ntBASIC8.12□□□□□ -1.11
NID1P14543 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 ARF4P4-201ENST00000439608 520 ntBASIC8.12□□□□□ -1.11
NID1P14543 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 TAF9P1-201ENST00000445421 515 ntBASIC8.12□□□□□ -1.11
NID1P14543 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 TAF9P2-201ENST00000454958 515 ntBASIC8.12□□□□□ -1.11
NID1P14543 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 IFNA22P-201ENST00000458710 570 ntBASIC8.12□□□□□ -1.11
NID1P14543 AC022701.1-201ENST00000462935 622 ntBASIC8.12□□□□□ -1.11
NID1P14543 RN7SL35P-201ENST00000466169 292 ntBASIC8.12□□□□□ -1.11
NID1P14543 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NID1P14543 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 AC020937.1-201ENST00000519677 1013 ntBASIC8.12□□□□□ -1.11
NID1P14543 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC8.12□□□□□ -1.11
NID1P14543 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 AC135626.1-201ENST00000556983 435 ntBASIC8.12□□□□□ -1.11
NID1P14543 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 AC087481.2-201ENST00000565492 330 ntBASIC8.12□□□□□ -1.11
NID1P14543 AC244090.2-201ENST00000567614 792 ntBASIC8.12□□□□□ -1.11
NID1P14543 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC8.12□□□□□ -1.11
NID1P14543 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC8.12□□□□□ -1.11
NID1P14543 AC015908.3-201ENST00000579529 667 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms