Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SLC1A1P43005 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 SNORA10-201ENST00000384084 133 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AL139806.1-201ENST00000403057 1002 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 GSTA10P-201ENST00000412182 576 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 RPL34P19-201ENST00000415903 342 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AC239798.1-201ENST00000449024 1176 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 AL590326.1-201ENST00000460857 334 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 RN7SL395P-201ENST00000462960 291 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 RN7SL201P-201ENST00000482306 296 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 RN7SL569P-201ENST00000494652 288 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 AL031864.2-201ENST00000498507 350 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC8.08□□□□□ -1.12
SLC1A1P43005 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
SLC1A1P43005 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.08□□□□□ -1.12
SLC1A1P43005 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC8.08□□□□□ -1.12
SLC1A1P43005 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.08□□□□□ -1.12
SLC1A1P43005 RN7SL123P-201ENST00000577239 292 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 OR7A18P-201ENST00000600416 277 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 SNORD91A-202ENST00000609620 191 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 AC243772.3-202ENST00000609662 1148 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 AC241585.4-201ENST00000640951 686 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 MIR193BHG-210ENST00000641327 515 ntBASIC8.08□□□□□ -1.12
SLC1A1P43005 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SLC1A1P43005 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SLC1A1P43005 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.08□□□□□ -1.12
SLC1A1P43005 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.08□□□□□ -1.12
SLC1A1P43005 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SLC1A1P43005 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
SLC1A1P43005 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.07□□□□□ -1.12
SLC1A1P43005 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
SLC1A1P43005 MAPK10-313ENST00000641405 2469 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SLC1A1P43005 OR8J3-201ENST00000301529 948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SLC1A1P43005 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 BMP2KL-201ENST00000414251 1225 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
SLC1A1P43005 RAC1P4-201ENST00000419413 579 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC8.07□□□□□ -1.12
SLC1A1P43005 AL590682.1-201ENST00000437248 344 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 AL583856.1-201ENST00000454078 1101 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 AC096915.1-201ENST00000456185 512 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 AC096922.1-201ENST00000461635 651 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 RPL12P40-201ENST00000467028 488 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.07□□□□□ -1.12
SLC1A1P43005 NTAN1P2-201ENST00000515730 940 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 SCARNA20.1-201ENST00000516009 138 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 AP004833.3-201ENST00000531893 322 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 GNG2-215ENST00000557376 573 ntTSL 4 BASIC8.07□□□□□ -1.12
SLC1A1P43005 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC8.07□□□□□ -1.12
SLC1A1P43005 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC8.07□□□□□ -1.12
SLC1A1P43005 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 AC106800.1-201ENST00000501221 1362 ntBASIC8.07□□□□□ -1.12
SLC1A1P43005 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SLC1A1P43005 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
SLC1A1P43005 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.06□□□□□ -1.12
SLC1A1P43005 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
SLC1A1P43005 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SLC1A1P43005 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.06□□□□□ -1.12
SLC1A1P43005 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SLC1A1P43005 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SLC1A1P43005 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms