Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPL12P47-201ENST00000406185 127 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 RNA5SP221-201ENST00000411271 103 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 USP9YP6-201ENST00000413550 854 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AF228730.4-201ENST00000421457 183 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TNPO1P1-201ENST00000423641 1138 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC152007.1-201ENST00000428521 224 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 TRIM60P3Y-201ENST00000432201 673 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 NANOGP2-201ENST00000435391 727 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 RPL24P8-201ENST00000446071 474 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC002366.1-201ENST00000446186 1190 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 CYCSP20-201ENST00000473154 315 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC093890.1-201ENST00000502554 540 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 MTCYBP17-201ENST00000503579 789 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 RNU6-405P-201ENST00000516637 110 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 RNU6-1028P-201ENST00000517164 93 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 RNU6-889P-201ENST00000517189 103 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TMEM97P2-201ENST00000517841 403 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 SNRPCP14-201ENST00000524498 205 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AP002469.1-201ENST00000526011 1043 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 LINC01579-201ENST00000553818 561 ntTSL 4 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AP005229.1-201ENST00000592198 810 ntTSL 3 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC018926.2-201ENST00000611214 498 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC104260.1-201ENST00000616660 539 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AL136221.1-201ENST00000621449 509 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 DUXAP9-208ENST00000622815 614 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC015871.5-202ENST00000623252 701 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 MRPL48-202ENST00000314282 1922 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TOX4P1-201ENST00000514955 1862 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 NSD2-212ENST00000503128 8568 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 FLII-215ENST00000545457 3975 ntTSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 WDR92-202ENST00000406245 1401 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 ZNF682-202ENST00000397162 3164 ntTSL 4 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 POTEA-202ENST00000522175 1931 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 C9orf43-201ENST00000288462 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 RNY4P24-201ENST00000362735 96 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 RNU2-65P-201ENST00000410162 185 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 AL671883.1-201ENST00000421191 306 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 IPPKP1-201ENST00000422501 768 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 KIF9-203ENST00000425452 640 ntTSL 3 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 BX119904.1-201ENST00000432026 348 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 HMGN2P24-201ENST00000433516 273 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 AC005588.1-201ENST00000439168 162 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 AL020997.1-201ENST00000446554 349 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 AC087501.2-201ENST00000466869 581 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 RNU6-1153P-201ENST00000516760 105 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC9.9□□□□□ -0.82
LRCH3Q96II8 AC021915.1-201ENST00000522541 824 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LRCH3Q96II8 FABP5P7-201ENST00000524732 405 ntBASIC9.9□□□□□ -0.82
LRCH3Q96II8 OR1D4-201ENST00000525719 939 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms