Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 USP17L11-201ENST00000457736 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L30-201ENST00000504104 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L18-201ENST00000504209 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L24-201ENST00000504481 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L28-201ENST00000504543 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L20-201ENST00000506151 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L16P-201ENST00000507155 1593 ntBASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L5-201ENST00000507227 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L9P-201ENST00000508843 1593 ntBASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L25-201ENST00000509271 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L26-201ENST00000509660 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L22-201ENST00000511280 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L17-201ENST00000511568 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L29-201ENST00000511681 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L19-201ENST00000515566 1593 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
PSEN1P49768 USP17L27-201ENST00000515574 1593 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PSEN1P49768 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PSEN1P49768 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC10.59□□□□□ -0.71
PSEN1P49768 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
PSEN1P49768 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PSEN1P49768 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC10.59□□□□□ -0.71
PSEN1P49768 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC10.59□□□□□ -0.71
PSEN1P49768 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PSEN1P49768 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PSEN1P49768 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PSEN1P49768 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC10.59□□□□□ -0.71
PSEN1P49768 MRPL19-202ENST00000393909 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PSEN1P49768 AC116553.3-201ENST00000624242 1800 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 LINC00635-202ENST00000464359 2119 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC10.58□□□□□ -0.72
PSEN1P49768 AL160191.3-201ENST00000619152 2203 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC10.58□□□□□ -0.72
PSEN1P49768 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
PSEN1P49768 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 KIF18B-202ENST00000587309 4217 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 PPHLN1-224ENST00000613154 1863 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 HAO2-205ENST00000622548 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 AC104472.1-201ENST00000399242 1585 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 PABPC1-224ENST00000610907 1569 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 KNG1-203ENST00000447445 1391 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 SAT2-201ENST00000269298 946 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 RN7SKP243-201ENST00000363105 309 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 MT-TR-201ENST00000387439 65 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 RNA5SP207-201ENST00000390874 107 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 AL627402.1-201ENST00000405276 735 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 HNRNPA1P64-201ENST00000411674 922 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 AL121878.1-201ENST00000418638 859 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 AL009174.1-201ENST00000426577 416 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 LINC00864-201ENST00000429129 746 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 RPL31P54-201ENST00000429803 370 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 AC073464.1-201ENST00000429823 534 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC096632.2-201ENST00000438139 1239 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 AL008718.1-201ENST00000445867 487 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 HNRNPA1P43-201ENST00000452680 910 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 MTCO3P11-201ENST00000455103 774 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC093166.4-201ENST00000457867 318 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC026427.2-201ENST00000506228 536 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 HPRT1P3-201ENST00000539521 576 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 TSFM-209ENST00000548851 794 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 CMC2-207ENST00000564174 424 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 SCML2P1-201ENST00000584511 1100 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 MIR548AB-201ENST00000584917 84 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 RPL27-207ENST00000590864 569 ntTSL 2 BASIC10.58□□□□□ -0.72
PSEN1P49768 NDUFA6-AS1-208ENST00000600968 662 ntTSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 AL078623.1-201ENST00000602702 907 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 AL137798.1-201ENST00000607700 339 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 MIR7850-201ENST00000618087 79 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 DPP6-216ENST00000619756 1109 ntTSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 U1.30-201ENST00000622285 165 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 AC012507.4-201ENST00000637275 504 ntTSL 3 BASIC10.58□□□□□ -0.72
PSEN1P49768 ABBA01000935.2-201ENST00000637477 838 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 OR55B1P-202ENST00000641245 1276 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
PSEN1P49768 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PSEN1P49768 PABPC1P9-201ENST00000426076 1612 ntBASIC10.58□□□□□ -0.72
PSEN1P49768 CD44-210ENST00000434472 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms