Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RNF13-211ENST00000470151 701 ntTSL 38.75□□□□□ -1.011e-6■■□□□ 12.6
PRPF8Q6P2Q9 TCF7L2-202ENST00000346198 667 ntTSL 36.03□□□□□ -1.446e-7■■□□□ 12.6
PRPF8Q6P2Q9 TAF15-209ENST00000604434 2103 nt14.82□□□□□ -0.042e-8■■□□□ 12.6
PRPF8Q6P2Q9 ERBB3-209ENST00000549282 561 ntTSL 413.05□□□□□ -0.328e-9■■□□□ 12.6
PRPF8Q6P2Q9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.34□□□□□ -0.438e-9■■□□□ 12.6
PRPF8Q6P2Q9 GUSB-214ENST00000489482 519 ntTSL 210.89□□□□□ -0.673e-8■■□□□ 12.6
PRPF8Q6P2Q9 PLEKHM2-204ENST00000477849 1057 ntTSL 513.7□□□□□ -0.222e-6■■□□□ 12.6
PRPF8Q6P2Q9 RPL18A-206ENST00000600238 954 ntTSL 29.24□□□□□ -0.934e-7■■□□□ 12.6
PRPF8Q6P2Q9 ACTB-203ENST00000417101 472 ntTSL 418.86■□□□□ 0.618e-16■■□□□ 12.6
PRPF8Q6P2Q9 ELMO3-204ENST00000571587 780 ntTSL 513.85□□□□□ -0.199e-8■■□□□ 12.6
PRPF8Q6P2Q9 ELMO3-205ENST00000571638 681 ntTSL 511.53□□□□□ -0.569e-8■■□□□ 12.6
PRPF8Q6P2Q9 ISOC2-206ENST00000589108 706 ntTSL 212.3□□□□□ -0.449e-8■■□□□ 12.6
PRPF8Q6P2Q9 PRPSAP1-211ENST00000588364 1004 ntTSL 58.22□□□□□ -1.094e-10■■□□□ 12.6
PRPF8Q6P2Q9 NDEL1-211ENST00000581679 582 ntTSL 42.63□□□□□ -1.993e-6■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.063e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.173e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-207ENST00000519208 662 ntTSL 413.67□□□□□ -0.223e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.233e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.253e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-215ENST00000521299 868 ntTSL 513.5□□□□□ -0.253e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-211ENST00000520150 1054 ntTSL 212.61□□□□□ -0.393e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.5□□□□□ -0.413e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-210ENST00000519398 562 ntTSL 212.26□□□□□ -0.453e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-222ENST00000523737 559 ntTSL 411.36□□□□□ -0.593e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.733e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-219ENST00000522663 2879 ntTSL 1 (best)9.98□□□□□ -0.813e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-208ENST00000519213 579 ntTSL 49.84□□□□□ -0.833e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-203ENST00000517338 548 ntTSL 49.21□□□□□ -0.943e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-223ENST00000523835 503 ntTSL 59.21□□□□□ -0.943e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-224ENST00000524068 556 ntTSL 49.08□□□□□ -0.963e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-209ENST00000519318 848 ntTSL 28.19□□□□□ -1.13e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-214ENST00000520995 535 ntTSL 58.17□□□□□ -1.13e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-218ENST00000522157 541 ntTSL 47.84□□□□□ -1.153e-9■■□□□ 12.6
PRPF8Q6P2Q9 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.273e-9■■□□□ 12.6
PRPF8Q6P2Q9 CTDSP2-208ENST00000552294 436 ntTSL 56.07□□□□□ -1.447e-9■■□□□ 12.6
PRPF8Q6P2Q9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.45e-9■■□□□ 12.6
PRPF8Q6P2Q9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.195e-9■■□□□ 12.6
PRPF8Q6P2Q9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.565e-9■■□□□ 12.6
PRPF8Q6P2Q9 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.655e-9■■□□□ 12.6
PRPF8Q6P2Q9 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC10.44□□□□□ -0.745e-9■■□□□ 12.6
PRPF8Q6P2Q9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.72■□□□□ 0.918e-11■■□□□ 12.6
PRPF8Q6P2Q9 PRMT2-215ENST00000498151 493 ntTSL 319.73■□□□□ 0.752e-19■■□□□ 12.6
PRPF8Q6P2Q9 PRMT2-214ENST00000491389 616 ntTSL 219.54■□□□□ 0.722e-19■■□□□ 12.6
PRPF8Q6P2Q9 GNPTG-209ENST00000534197 420 ntTSL 319.24■□□□□ 0.678e-11■■□□□ 12.6
PRPF8Q6P2Q9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.14■□□□□ 0.652e-8■■□□□ 12.6
PRPF8Q6P2Q9 GNPTG-206ENST00000527876 550 ntTSL 419.14■□□□□ 0.658e-11■■□□□ 12.6
PRPF8Q6P2Q9 GNPTG-207ENST00000529110 552 ntTSL 218.74■□□□□ 0.596e-11■■□□□ 12.6
PRPF8Q6P2Q9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.382e-8■■□□□ 12.6
PRPF8Q6P2Q9 GNPTG-202ENST00000526820 572 ntTSL 316.71■□□□□ 0.276e-11■■□□□ 12.6
PRPF8Q6P2Q9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.3■□□□□ 0.22e-8■■□□□ 12.6
PRPF8Q6P2Q9 GPAA1-209ENST00000527653 856 ntTSL 216.08■□□□□ 0.172e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.72■□□□□ 0.112e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.94□□□□□ -0.342e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-216ENST00000639335 1327 ntTSL 512.16□□□□□ -0.462e-8■■□□□ 12.6
PRPF8Q6P2Q9 PRMT2-212ENST00000482508 1478 ntTSL 1 (best)12.1□□□□□ -0.472e-19■■□□□ 12.6
PRPF8Q6P2Q9 PRMT2-209ENST00000455177 581 ntTSL 312.1□□□□□ -0.472e-19■■□□□ 12.6
PRPF8Q6P2Q9 HADH-220ENST00000640060 1895 ntTSL 511.23□□□□□ -0.612e-8■■□□□ 12.6
PRPF8Q6P2Q9 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC11.18□□□□□ -0.622e-19■■□□□ 12.6
PRPF8Q6P2Q9 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.26□□□□□ -0.772e-8■■□□□ 12.6
PRPF8Q6P2Q9 PRMT2-211ENST00000481861 1301 ntTSL 1 (best)10.05□□□□□ -0.82e-19■■□□□ 12.6
PRPF8Q6P2Q9 HADH-211ENST00000638559 1369 ntTSL 510.03□□□□□ -0.82e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-221ENST00000640201 1972 ntTSL 59.98□□□□□ -0.812e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-215ENST00000639146 1964 ntTSL 59.75□□□□□ -0.852e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-210ENST00000626637 1774 ntTSL 2 BASIC9.56□□□□□ -0.882e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-223ENST00000640752 5948 ntTSL 59.35□□□□□ -0.912e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-213ENST00000638648 1910 ntTSL 28.46□□□□□ -1.062e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-219ENST00000640048 1670 ntTSL 57.89□□□□□ -1.152e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-204ENST00000507260 3057 ntTSL 27.65□□□□□ -1.182e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-218ENST00000639784 1355 ntTSL 57.55□□□□□ -1.22e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-222ENST00000640586 3308 ntTSL 57.43□□□□□ -1.222e-8■■□□□ 12.6
PRPF8Q6P2Q9 HADH-217ENST00000639698 1507 ntTSL 57.31□□□□□ -1.242e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-201ENST00000339416 5653 ntTSL 27.17□□□□□ -1.262e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC6.84□□□□□ -1.312e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-212ENST00000472874 586 ntTSL 56.77□□□□□ -1.332e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC6.54□□□□□ -1.362e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.17□□□□□ -1.422e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.462e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.482e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.562e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-209ENST00000449796 750 ntTSL 55.09□□□□□ -1.592e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.672e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-217ENST00000630992 11831 ntTSL 24.48□□□□□ -1.692e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.94□□□□□ -1.782e-8■■□□□ 12.6
PRPF8Q6P2Q9 DOCK9-210ENST00000450257 348 ntTSL 53.25□□□□□ -1.892e-8■■□□□ 12.6
PRPF8Q6P2Q9 SSR1-207ENST00000479485 640 ntTSL 22.56□□□□□ -22e-8■■□□□ 12.6
PRPF8Q6P2Q9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.72■□□□□ 0.273e-19■■□□□ 12.6
PRPF8Q6P2Q9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.223e-19■■□□□ 12.6
PRPF8Q6P2Q9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.353e-19■■□□□ 12.6
PRPF8Q6P2Q9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.373e-19■■□□□ 12.6
PRPF8Q6P2Q9 TRAPPC12-214ENST00000462983 543 ntTSL 47.8□□□□□ -1.161e-6■■□□□ 12.6
PRPF8Q6P2Q9 ACTB-210ENST00000477812 820 ntTSL 216.57■□□□□ 0.241e-13■■□□□ 12.6
PRPF8Q6P2Q9 POLR2E-203ENST00000586215 756 ntTSL 212.56□□□□□ -0.42e-10■■□□□ 12.6
PRPF8Q6P2Q9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.843e-6■■□□□ 12.6
PRPF8Q6P2Q9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.523e-6■■□□□ 12.6
PRPF8Q6P2Q9 IFNGR2-205ENST00000439213 906 ntTSL 518.3■□□□□ 0.523e-6■■□□□ 12.6
PRPF8Q6P2Q9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.45■□□□□ 0.383e-6■■□□□ 12.6
PRPF8Q6P2Q9 IFNGR2-206ENST00000545369 966 ntTSL 515.82■□□□□ 0.123e-6■■□□□ 12.6
PRPF8Q6P2Q9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.528e-8■■□□□ 12.6
PRPF8Q6P2Q9 PROC-208ENST00000442644 600 ntTSL 317.07■□□□□ 0.325e-18■■□□□ 12.6
PRPF8Q6P2Q9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.295e-18■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 459.7 ms