Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PTK2-224ENST00000520843 438 ntTSL 5-0.49□□□□□ -2.499e-6■■□□□ 12.6
PRPF8Q6P2Q9 SDHA-215ENST00000512962 935 ntTSL 311.08□□□□□ -0.642e-6■■□□□ 12.6
PRPF8Q6P2Q9 SNAP47-208ENST00000478768 870 ntAPPRIS ALT2 TSL 39.02□□□□□ -0.971e-7■■□□□ 12.6
PRPF8Q6P2Q9 SLC23A1-207ENST00000508270 509 ntTSL 311.84□□□□□ -0.517e-13■■□□□ 12.6
PRPF8Q6P2Q9 SLC23A1-204ENST00000503919 559 ntTSL 49.87□□□□□ -0.837e-13■■□□□ 12.6
PRPF8Q6P2Q9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.195e-7■■□□□ 12.6
PRPF8Q6P2Q9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.365e-7■■□□□ 12.6
PRPF8Q6P2Q9 SLC43A3-201ENST00000352187 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.025e-7■■□□□ 12.6
PRPF8Q6P2Q9 GIGYF2-232ENST00000474465 625 ntTSL 26.73□□□□□ -1.334e-6■■□□□ 12.6
PRPF8Q6P2Q9 PAH-218ENST00000635528 960 ntTSL 34.21□□□□□ -1.743e-9■■□□□ 12.6
PRPF8Q6P2Q9 SEPT9-221ENST00000588958 879 ntTSL 213.68□□□□□ -0.221e-7■■□□□ 12.6
PRPF8Q6P2Q9 SEPT9-247ENST00000593189 817 ntTSL 59.87□□□□□ -0.831e-7■■□□□ 12.6
PRPF8Q6P2Q9 ABHD12-206ENST00000471287 805 ntTSL 316.46■□□□□ 0.231e-7■■□□□ 12.6
PRPF8Q6P2Q9 ABHD12-208ENST00000491682 814 ntTSL 311.92□□□□□ -0.51e-7■■□□□ 12.6
PRPF8Q6P2Q9 ABHD12-203ENST00000450393 615 ntTSL 58.81□□□□□ -11e-7■■□□□ 12.6
PRPF8Q6P2Q9 CSNK1D-210ENST00000579308 598 ntTSL 29.29□□□□□ -0.922e-11■■□□□ 12.6
PRPF8Q6P2Q9 ABCC10-209ENST00000502549 478 ntTSL 313.53□□□□□ -0.247e-7■■□□□ 12.6
PRPF8Q6P2Q9 CHTF18-206ENST00000461268 814 ntTSL 514.89□□□□□ -0.039e-8■■□□□ 12.6
PRPF8Q6P2Q9 IKBKG-205ENST00000492469 552 ntTSL 516.71■□□□□ 0.277e-7■■□□□ 12.6
PRPF8Q6P2Q9 IKBKG-204ENST00000445622 693 ntTSL 510.28□□□□□ -0.767e-7■■□□□ 12.6
PRPF8Q6P2Q9 ARFGAP2-219ENST00000529439 556 ntTSL 516.09■□□□□ 0.172e-14■■□□□ 12.6
PRPF8Q6P2Q9 ARFGAP2-215ENST00000528041 578 ntTSL 49.17□□□□□ -0.942e-14■■□□□ 12.6
PRPF8Q6P2Q9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.92■□□□□ 0.462e-8■■□□□ 12.6
PRPF8Q6P2Q9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.252e-8■■□□□ 12.6
PRPF8Q6P2Q9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.57■□□□□ 0.082e-8■■□□□ 12.6
PRPF8Q6P2Q9 MARK4-206ENST00000590897 717 ntTSL 218.35■□□□□ 0.532e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-248ENST00000639783 1691 ntTSL 213.9□□□□□ -0.188e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-269ENST00000640692 1948 ntTSL 513.7□□□□□ -0.228e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.64□□□□□ -0.238e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.15□□□□□ -0.38e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-206ENST00000455050 1807 ntTSL 213.05□□□□□ -0.328e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.68□□□□□ -0.388e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.66□□□□□ -0.388e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-222ENST00000638612 2311 ntTSL 512.56□□□□□ -0.48e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-256ENST00000640194 1810 ntTSL 512.44□□□□□ -0.428e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-224ENST00000638671 1944 ntTSL 212.39□□□□□ -0.438e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-253ENST00000640108 2109 ntTSL 512.24□□□□□ -0.458e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-228ENST00000638714 1886 ntTSL 512.24□□□□□ -0.458e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.468e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-232ENST00000638938 1985 ntTSL 512.13□□□□□ -0.478e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-250ENST00000639932 2158 ntTSL 512.11□□□□□ -0.478e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-252ENST00000640107 2105 ntTSL 511.9□□□□□ -0.58e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.85□□□□□ -0.518e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC11.78□□□□□ -0.528e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-217ENST00000638445 2088 ntTSL 211.72□□□□□ -0.538e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-211ENST00000638246 2032 ntTSL 511.46□□□□□ -0.578e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-264ENST00000640585 2203 ntTSL 511.36□□□□□ -0.598e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-255ENST00000640175 1429 ntTSL 211.29□□□□□ -0.68e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-215ENST00000638387 2170 ntTSL 511.27□□□□□ -0.618e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-271ENST00000640986 2187 ntTSL 211.27□□□□□ -0.618e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-259ENST00000640272 2112 ntTSL 511.24□□□□□ -0.618e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-251ENST00000639984 1965 ntTSL 511.2□□□□□ -0.628e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.2□□□□□ -0.628e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-272ENST00000640996 2219 ntTSL 511.08□□□□□ -0.648e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-267ENST00000640666 2502 ntTSL 510.78□□□□□ -0.688e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-236ENST00000638978 2091 ntTSL 59.88□□□□□ -0.838e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-261ENST00000640364 2840 ntTSL 59.87□□□□□ -0.838e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-214ENST00000638383 2235 ntTSL 59.69□□□□□ -0.868e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-262ENST00000640542 2169 ntTSL 59.46□□□□□ -0.98e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-260ENST00000640324 2098 ntTSL 59.28□□□□□ -0.928e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-225ENST00000638689 4314 ntTSL 58.69□□□□□ -1.028e-7■■□□□ 12.6
PRPF8Q6P2Q9 PIGT-229ENST00000638745 6087 ntTSL 57.89□□□□□ -1.158e-7■■□□□ 12.6
PRPF8Q6P2Q9 NELFCD-203ENST00000471621 902 ntTSL 212.95□□□□□ -0.343e-7■■□□□ 12.6
PRPF8Q6P2Q9 SNORD70.1-201ENST00000391007 85 ntBASIC-1.43□□□□□ -2.646e-10■■□□□ 12.6
PRPF8Q6P2Q9 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC9.87□□□□□ -0.832e-6■■□□□ 12.6
PRPF8Q6P2Q9 PABPC1L-212ENST00000479873 1178 ntTSL 27.93□□□□□ -1.142e-6■■□□□ 12.6
PRPF8Q6P2Q9 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC7.47□□□□□ -1.212e-6■■□□□ 12.6
PRPF8Q6P2Q9 GRHPR-207ENST00000491488 602 ntTSL 515.99■□□□□ 0.152e-7■■□□□ 12.6
PRPF8Q6P2Q9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.152e-7■■□□□ 12.6
PRPF8Q6P2Q9 GRHPR-202ENST00000377824 1844 ntTSL 213.83□□□□□ -0.22e-7■■□□□ 12.6
PRPF8Q6P2Q9 GRHPR-203ENST00000460882 1080 ntTSL 1 (best)13.76□□□□□ -0.212e-7■■□□□ 12.6
PRPF8Q6P2Q9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.75□□□□□ -0.372e-7■■□□□ 12.6
PRPF8Q6P2Q9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.32□□□□□ -0.125e-8■■□□□ 12.6
PRPF8Q6P2Q9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.185e-8■■□□□ 12.6
PRPF8Q6P2Q9 OAZ1-204ENST00000588673 780 ntTSL 317.47■□□□□ 0.393e-9■■□□□ 12.6
PRPF8Q6P2Q9 OAZ1-203ENST00000586054 2832 nt15.79■□□□□ 0.123e-9■■□□□ 12.6
PRPF8Q6P2Q9 OAZ1-208ENST00000592727 726 ntTSL 213.02□□□□□ -0.333e-9■■□□□ 12.6
PRPF8Q6P2Q9 MMD-203ENST00000577038 570 ntTSL 214.67□□□□□ -0.065e-20■■□□□ 12.6
PRPF8Q6P2Q9 HSD17B12-204ENST00000527213 571 ntTSL 41.44□□□□□ -2.184e-8■■□□□ 12.6
PRPF8Q6P2Q9 KLHL17-202ENST00000463212 955 ntTSL 1 (best)13.67□□□□□ -0.222e-6■■□□□ 12.6
PRPF8Q6P2Q9 LTBP3-203ENST00000524798 849 ntTSL 416.88■□□□□ 0.293e-7■■□□□ 12.6
PRPF8Q6P2Q9 LTBP3-216ENST00000530426 431 ntTSL 412.38□□□□□ -0.433e-7■■□□□ 12.6
PRPF8Q6P2Q9 MORC2-204ENST00000445980 766 ntTSL 57.95□□□□□ -1.142e-7■■□□□ 12.6
PRPF8Q6P2Q9 PPP2R2D-203ENST00000472664 770 ntTSL 312.22□□□□□ -0.454e-10■■□□□ 12.6
PRPF8Q6P2Q9 PPP2R2D-206ENST00000517472 573 ntTSL 31.69□□□□□ -2.144e-10■■□□□ 12.6
PRPF8Q6P2Q9 TRA2B-212ENST00000480461 538 ntTSL 1 (best)10.13□□□□□ -0.793e-12■■□□□ 12.6
PRPF8Q6P2Q9 DHPS-205ENST00000593432 556 ntTSL 411.42□□□□□ -0.587e-7■■□□□ 12.6
PRPF8Q6P2Q9 DHPS-211ENST00000596162 595 ntTSL 37.49□□□□□ -1.217e-7■■□□□ 12.6
PRPF8Q6P2Q9 TCF25-213ENST00000564957 459 ntTSL 315.23■□□□□ 0.033e-14■■□□□ 12.6
PRPF8Q6P2Q9 TCF25-216ENST00000565860 437 ntTSL 315.23■□□□□ 0.033e-14■■□□□ 12.6
PRPF8Q6P2Q9 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.45■□□□□ 0.869e-12■■□□□ 12.6
PRPF8Q6P2Q9 GRAMD1A-208ENST00000598362 776 ntTSL 26.31□□□□□ -1.49e-12■■□□□ 12.6
PRPF8Q6P2Q9 CHRD-207ENST00000459711 503 ntTSL 217.87■□□□□ 0.453e-7■■□□□ 12.6
PRPF8Q6P2Q9 AGAP3-219ENST00000485904 683 ntTSL 316.97■□□□□ 0.313e-7■■□□□ 12.6
PRPF8Q6P2Q9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.82□□□□□ -0.043e-9■■□□□ 12.6
PRPF8Q6P2Q9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.173e-9■■□□□ 12.6
PRPF8Q6P2Q9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.69□□□□□ -0.223e-9■■□□□ 12.6
PRPF8Q6P2Q9 RAB17-206ENST00000414278 1511 ntTSL 212.84□□□□□ -0.353e-9■■□□□ 12.6
PRPF8Q6P2Q9 RAB17-202ENST00000392001 1792 ntTSL 1 (best)12.5□□□□□ -0.413e-9■■□□□ 12.6
PRPF8Q6P2Q9 RNF13-205ENST00000466478 593 ntTSL 512.36□□□□□ -0.431e-6■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 468.1 ms