Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CSNK1G3Q9Y6M4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 SLC25A24-204ENST00000569674 2357 ntBASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 KRASP1-201ENST00000407852 552 ntBASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 AC073912.3-201ENST00000624414 853 ntBASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSNK1G3Q9Y6M4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 PRKY-204ENST00000533551 1019 ntBASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 MIR2861-201ENST00000636310 90 ntBASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 KRT8P36-201ENST00000489121 1440 ntBASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 KRT17P2-201ENST00000300992 1314 ntBASIC19.75■□□□□ 0.75
CSNK1G3Q9Y6M4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 RARRES2P10-201ENST00000564312 460 ntBASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.74■□□□□ 0.75
CSNK1G3Q9Y6M4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 AL121829.2-201ENST00000620908 328 ntBASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 AL049637.2-201ENST00000641778 930 ntBASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.73■□□□□ 0.75
CSNK1G3Q9Y6M4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms