Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX11Q9Y5W9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.02■□□□□ 0.79
SNX11Q9Y5W9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 TSPY15P-201ENST00000457163 923 ntBASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 KRT18P21-201ENST00000515767 1272 ntBASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 AC113410.3-201ENST00000623366 203 ntBASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX11Q9Y5W9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 MIR4785-201ENST00000585005 73 ntBASIC20■□□□□ 0.79
SNX11Q9Y5W9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX11Q9Y5W9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20■□□□□ 0.79
SNX11Q9Y5W9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 PRKY-204ENST00000533551 1019 ntBASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX11Q9Y5W9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 AC010331.1-201ENST00000611423 582 ntBASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX11Q9Y5W9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX11Q9Y5W9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms