Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHB11Q9Y5F2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 MIR2861-201ENST00000636310 90 ntBASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 AC073648.6-201ENST00000641589 218 ntBASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 AC087633.2-202ENST00000565166 1439 ntBASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB11Q9Y5F2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 UBE2SP1-201ENST00000450587 669 ntBASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB11Q9Y5F2 KRT17P1-201ENST00000399211 1546 ntBASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 KRT18P68-201ENST00000392293 1000 ntBASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 AL355472.2-201ENST00000422958 438 ntBASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB11Q9Y5F2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 AL596275.1-201ENST00000423464 877 ntBASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB11Q9Y5F2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms