Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 MIR4758-201ENST00000577688 71 ntBASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 AC092118.2-201ENST00000613495 667 ntBASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 DPP3P2-201ENST00000416030 1696 ntBASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHB13Q9Y5F0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 AC104771.1-201ENST00000603335 964 ntBASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB13Q9Y5F0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 AL512408.1-201ENST00000569378 2000 ntBASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB13Q9Y5F0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 AL162377.1-201ENST00000618844 1793 ntBASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB13Q9Y5F0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 SMG8-203ENST00000578922 2178 ntBASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB13Q9Y5F0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHB13Q9Y5F0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
PCDHB13Q9Y5F0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms