Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 HTR7P1-201ENST00000538670 1336 ntBASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 AC087499.1-201ENST00000418141 1075 ntBASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB7Q9Y5E2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 KRT18P21-201ENST00000515767 1272 ntBASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 AF186192.3-201ENST00000583427 947 ntBASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 AC026471.5-201ENST00000615068 467 ntBASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 AL121906.2-201ENST00000621597 723 ntBASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB7Q9Y5E2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 AL117328.2-201ENST00000624617 1940 ntBASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 AL353807.1-201ENST00000427475 662 ntBASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 AL355355.2-201ENST00000442321 338 ntBASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHB7Q9Y5E2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 AL049796.1-201ENST00000565336 1766 ntBASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB7Q9Y5E2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
PCDHB7Q9Y5E2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHB7Q9Y5E2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 HLA-G-202ENST00000376815 851 ntBASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 HLA-G-203ENST00000376818 1127 ntBASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 AP003071.4-201ENST00000562276 1284 ntBASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 CD177P1-201ENST00000606252 935 ntBASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB7Q9Y5E2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHB7Q9Y5E2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms