Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 GRAP-204ENST00000573099 846 ntTSL 3 BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 AL121906.2-201ENST00000621597 723 ntBASIC26.49■■□□□ 1.83
SPG7Q9UQ90 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
SPG7Q9UQ90 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 AP003071.4-201ENST00000562276 1284 ntBASIC26.48■■□□□ 1.83
SPG7Q9UQ90 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 AC097493.4-201ENST00000641197 219 ntBASIC26.48■■□□□ 1.83
SPG7Q9UQ90 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SPG7Q9UQ90 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 CD177P1-201ENST00000606252 935 ntBASIC26.47■■□□□ 1.83
SPG7Q9UQ90 AC012306.2-201ENST00000609350 630 ntBASIC26.47■■□□□ 1.83
SPG7Q9UQ90 AC010331.1-201ENST00000611423 582 ntBASIC26.47■■□□□ 1.83
SPG7Q9UQ90 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SPG7Q9UQ90 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 AL355355.2-201ENST00000442321 338 ntBASIC26.46■■□□□ 1.83
SPG7Q9UQ90 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.46■■□□□ 1.83
SPG7Q9UQ90 AC121338.2-201ENST00000622535 1744 ntBASIC26.45■■□□□ 1.83
SPG7Q9UQ90 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SPG7Q9UQ90 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SPG7Q9UQ90 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SPG7Q9UQ90 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 AL049796.1-201ENST00000565336 1766 ntBASIC26.43■■□□□ 1.82
SPG7Q9UQ90 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.43■■□□□ 1.82
SPG7Q9UQ90 AL353708.3-201ENST00000610272 989 ntBASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms