Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RABGEF1Q9UJ41 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RABGEF1Q9UJ41 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RABGEF1Q9UJ41 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RABGEF1Q9UJ41 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RABGEF1Q9UJ41 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.64■□□□□ 0.9
RABGEF1Q9UJ41 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 KRT18P20-201ENST00000548986 1279 ntBASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RABGEF1Q9UJ41 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.63■□□□□ 0.89
RABGEF1Q9UJ41 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 MIR2861-201ENST00000636310 90 ntBASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RABGEF1Q9UJ41 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RABGEF1Q9UJ41 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RABGEF1Q9UJ41 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
RABGEF1Q9UJ41 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RABGEF1Q9UJ41 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RABGEF1Q9UJ41 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.6■□□□□ 0.89
RABGEF1Q9UJ41 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms