Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIT1Q9P2V4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.56■□□□□ 0.72
LRIT1Q9P2V4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 SNORA78-201ENST00000459373 127 ntBASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 AC023632.3-201ENST00000521633 145 ntBASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 PRKY-204ENST00000533551 1019 ntBASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRIT1Q9P2V4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRIT1Q9P2V4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 RPS2P55-201ENST00000397318 883 ntBASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 AC107956.1-201ENST00000494359 873 ntBASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
LRIT1Q9P2V4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 AC012618.2-201ENST00000428058 849 ntBASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 AC233702.5-201ENST00000584107 538 ntBASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 CLDN5-201ENST00000403084 2357 ntBASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRIT1Q9P2V4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.71
LRIT1Q9P2V4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
LRIT1Q9P2V4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LRIT1Q9P2V4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
LRIT1Q9P2V4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.52■□□□□ 0.71
LRIT1Q9P2V4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 AC026310.3-201ENST00000625186 2373 ntBASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms