Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 FAM21FP-204ENST00000608637 956 ntBASIC19.05■□□□□ 0.64
VAPAQ9P0L0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 AC004854.2-201ENST00000608450 1441 ntBASIC19.05■□□□□ 0.64
VAPAQ9P0L0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.05■□□□□ 0.64
VAPAQ9P0L0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 AL020996.1-203ENST00000536896 2307 ntBASIC19.04■□□□□ 0.64
VAPAQ9P0L0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPAQ9P0L0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPAQ9P0L0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VAPAQ9P0L0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.02■□□□□ 0.63
VAPAQ9P0L0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.02■□□□□ 0.63
VAPAQ9P0L0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.02■□□□□ 0.63
VAPAQ9P0L0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 TREX1-205ENST00000625293 1783 ntBASIC19.01■□□□□ 0.63
VAPAQ9P0L0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.01■□□□□ 0.63
VAPAQ9P0L0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 YBX1P1-201ENST00000445822 960 ntBASIC19.01■□□□□ 0.63
VAPAQ9P0L0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VAPAQ9P0L0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms